RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 TRAPPC2LH3BP13 241 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 P2RY10O00398 339 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 CDIPTO14735 213 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 EGR1P18146 543 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 PSMB10P40306 273 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 IL5RAQ01344 420 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ZNF91Q05481 1191 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 SNCBQ16143 134 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 CEP78Q5JTW2 689 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 CATSPERDQ86XM0 798 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ZDHHC23Q8IYP9 409 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 APH1BQ8WW43 257 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 LGALS12Q96DT0 336 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 RNF170Q96K19 258 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 MICU1Q9BPX6 476 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 MOB1AQ9H8S9 216 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ACOXLQ9NUZ1 547 aa11.78□□□□□ -0.52
HLA-DQB1-202ENST00000399079 A0A0G2JMP0 313 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 A0A0X1KG70 313 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 DAPL1A0PJW8 107 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ERICH4A6NGS2 130 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 MPZL2O60487 215 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 FOXH1O75593 365 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 SULT1C4O75897 302 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 DHRS3O75911 302 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 FSTL3O95633 263 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 LHBP01229 141 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 DBTP11182 482 aaKnown RBP11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 PCMT1P22061 227 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 GPM6AP51674 278 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 OR12D2P58182 307 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 RIPPLY1Q0D2K3 151 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ESCO2Q56NI9 601 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 DCAF12L2Q5VW00 463 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 WDR82Q6UXN9 313 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 KCTD8Q6ZWB6 473 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 THAP5Q7Z6K1 395 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 PRSS35Q8N3Z0 413 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 ZNF555Q8NEP9 628 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 OR4M2Q8NGB6 313 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 LRRC29Q8WV35 223 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 RPL3LQ92901 407 aaKnown RBP11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 RNF166Q96A37 237 aaPredicted RBP11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 SEH1LQ96EE3 360 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 RDH12Q96NR8 316 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 RTL8AQ9BWD3 113 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 TMPRSS13Q9BYE2 586 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 MIOXQ9UGB7 285 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 EXOGQ9Y2C4 368 aaKnown RBP11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 MYRFQ9Y2G1 1151 aa11.77□□□□□ -0.52
HLA-DQB1-202ENST00000399079 LOC105371242A0A075B767 164 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 IGHV3OR15-7A0A075B7D8 119 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 SNTNA6NMZ2 147 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 WBP4O75554 376 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ADRA2CP18825 462 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 SRP14P37108 136 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 GMFBP60983 142 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ISL1P61371 349 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 SMN1Q16637 294 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 FAM76BQ5HYJ3 339 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 WDR38Q5JTN6 314 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DCDC5Q6ZRR9 648 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 KRT74Q7RTS7 529 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 LHFPL3Q86UP9 236 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ACBD7Q8N6N7 88 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 SCCPDHQ8NBX0 429 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 CYGBQ8WWM9 190 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 Q96MT0 163 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 SSBP3Q9BWW4 388 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 TLNRD1Q9H1K6 362 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 V9GYS6 101 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OOEPA6NGQ2 149 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 A8MXK9 166 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 LGALS8O00214 317 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 MTRF1O75570 445 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 IFNA2P01563 188 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 GYPAP02724 150 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ATP6V1B1P15313 513 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 GNB2P62879 340 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ACTC1P68032 377 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ACTA1P68133 377 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ELF3P78545 371 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 CEACAM21Q3KPI0 293 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 CDONQ4KMG0 1287 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 MOB3CQ70IA8 216 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 FAM220AQ7Z4H9 259 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 FAM90A1Q86YD7 464 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 RDH10Q8IZV5 341 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OR14K1Q8NGZ2 314 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 CNIH3Q8TBE1 160 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 NEIL1Q96FI4 390 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 HIST1H2AAQ96QV6 131 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 C7orf69Q9H7B7 122 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 RNPEPL1Q9HAU8 725 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 CTSZQ9UBR2 303 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 NKX1-2Q9UD57 310 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ENPP5Q9UJA9 477 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 LRCH1Q9Y2L9 728 aa11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 POLR3KQ9Y2Y1 108 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB1-202ENST00000399079 TRAV38-1A0A0B4J264 116 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms