RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 TMEM52Q8NDY8 209 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 GPR119Q8TDV5 335 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 OR8B4Q96RC9 309 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 RAB18Q9NP72 206 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 ARPC3O15145 178 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 ZGLP1P0C6A0 271 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 DUSP1P28562 367 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 TMEM33P57088 247 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 PTCRAQ6ISU1 281 aaPredicted RBP13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 WDR88Q6ZMY6 472 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 ARRDC1Q8N5I2 433 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 TMEM37Q8WXS4 190 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 MED29Q9NX70 200 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 IGHV5-51A0A0C4DH38 117 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 HOXB9P17482 250 aaPredicted RBP13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 THBS2P35442 1172 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 CCR5P51681 352 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 EEF1A1P68104 462 aaKnown RBP13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 MALLQ13021 153 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 JMJD6Q6NYC1 403 aaPredicted RBP13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 DTWD2Q8NBA8 298 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 KTI12Q96EK9 354 aaPredicted RBP13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 FAM210BQ96KR6 192 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 ANKRD10Q9NXR5 420 aa13.07□□□□□ -0.32
RPRD1A-202ENST00000399022 PATJQ8NI35 1801 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 ADAM11O75078 769 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 SLC25A4P12235 298 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 NANOS3P60323 173 aaKnown RBP13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 C2orf68Q2NKX9 166 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 PRR18Q8N4B5 295 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 MAGT1Q9H0U3 335 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 ALX4Q9H161 411 aaPredicted RBP13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 PLK3Q9H4B4 646 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 B9D1Q9UPM9 204 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 A0A087WUJ7 227 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 MPGP29372 298 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 SCAND1P57086 179 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 DCDP81605 110 aaKnown RBP13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 GRINAQ7Z429 371 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 OTOSQ8NHW6 89 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 DNAJB12Q9NXW2 375 aaKnown RBP13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 SFT2D2O95562 160 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 TK1P04183 234 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 NR0B2Q15466 257 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 TGIF1Q15583 401 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 NSUN5P2Q63ZY6 315 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 ZNF66Q6ZN08 573 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 BAGE3Q86Y29 109 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 BAGE2Q86Y30 109 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 RPUSD4Q96CM3 377 aaKnown RBP13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 WWTR1Q9GZV5 400 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 C4orf51C9J302 202 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 CLDN17P56750 224 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 PRTGQ2VWP7 1150 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 DHRS7BQ6IAN0 325 aaPredicted RBP13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 IL22RA1Q8N6P7 574 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 SP7Q8TDD2 431 aaPredicted RBP13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 GABRG3Q99928 467 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 POMT1Q9Y6A1 747 aa13.06□□□□□ -0.32
RPRD1A-202ENST00000399022 CACNA1EQ15878 2313 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 GPR37O15354 613 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 ZNF25P17030 456 aaPredicted RBP13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 HTD2P86397 168 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 C16orf47Q6ZP98 133 aaPredicted RBP13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 SLC25A42Q86VD7 318 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 OR52N5Q8NH56 324 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 CHST11Q9NPF2 352 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 DNAJB11Q9UBS4 358 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 SLC5A6Q9Y289 635 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 A0A1W2PNR3 127 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 A0A1W2PQF6 199 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 DDAH2O95865 285 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 PDGFBP01127 241 aaPredicted RBP13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 RNF224P0DH78 156 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 RCC1P18754 421 aaPredicted RBP13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 EFNA3P52797 238 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 ELLP55199 621 aaPredicted RBP13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 MLF1P58340 268 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 ARTNQ5T4W7 220 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 ZNF485Q8NCK3 441 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 GPX8Q8TED1 209 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 IL1F10Q8WWZ1 152 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 PACRGQ96M98 296 aaPredicted RBP13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 METTL9Q9H1A3 318 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 C5orf67F2Z3F1 127 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 CST7O76096 145 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 PIGPP57054 158 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 EMC4Q5J8M3 183 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 C9orf135Q5VTT2 229 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 SNX22Q96L94 193 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 FLRT3Q9NZU0 649 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 CES1P1Q9UKY3 287 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 ZMIZ1Q9ULJ6 1067 aa13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 TPRP12270 2363 aaKnown RBP13.05□□□□□ -0.32
RPRD1A-202ENST00000399022 ACAA1P09110 424 aaPredicted RBP13.04□□□□□ -0.32
RPRD1A-202ENST00000399022 HOXC12P31275 282 aa13.04□□□□□ -0.32
RPRD1A-202ENST00000399022 COL19A1Q14993 1142 aa13.04□□□□□ -0.32
RPRD1A-202ENST00000399022 ADAD2Q8NCV1 583 aaKnown RBP13.04□□□□□ -0.32
RPRD1A-202ENST00000399022 RTN4IP1Q8WWV3 396 aaPredicted RBP13.04□□□□□ -0.32
RPRD1A-202ENST00000399022 SMIM7Q9BQ49 75 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms