RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 WDR92Q96MX6 357 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 SLC26A1Q9H2B4 701 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 TDRD6O60522 2096 aaKnown RBP8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 PMS2P1A4D2B8 440 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 B4DGG1 531 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 LDLRAD4O15165 306 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 TNFSF12O43508 249 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 OR2C1O95371 312 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 TXNDC12O95881 172 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 AGAP20933 346 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 P2RY4P51582 365 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 PYY3Q5JQD4 70 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 CARD17Q5XLA6 110 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 KLHL24Q6TFL4 600 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 BTNL8Q6UX41 500 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 SLC22A24Q8N4F4 322 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 FAM213BQ8TBF2 198 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 SLC37A2Q8TED4 501 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 PMM1Q92871 262 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 TSLPQ969D9 159 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 SGK3Q96BR1 496 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 SAT2Q96F10 170 aaPredicted RBP8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 RARRES2Q99969 163 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 SH3BGRL3Q9H299 93 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 METTL1Q9UBP6 276 aaKnown RBP8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 GPR132Q9UNW8 380 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 MRPS28Q9Y2Q9 187 aaKnown RBP8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 WDFY3Q8IZQ1 3526 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 A0A0A6YYD4 124 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 IGLV1-36A0A0B4J1U3 117 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 A0A0J9YY10 115 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 DBX1A6NMT0 343 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 H3BML4 177 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 APODP05090 189 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 GP1BBP13224 206 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 MYOGP15173 224 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 IL12BP29460 328 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 SNU13P55769 128 aaKnown RBP8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 TAS2R31P59538 309 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 POU3F1Q03052 451 aaPredicted RBP8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 ACY1Q03154 408 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 TSPO2Q5TGU0 170 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 SHISA6Q6ZSJ9 500 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 HIST2H3AQ71DI3 136 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF248Q8NDW4 579 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 OR13G1Q8NGZ3 307 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 SPPL3Q8TCT6 385 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 THRSPQ92748 146 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 TCEAL7Q9BRU2 100 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 RPP25Q9BUL9 199 aaKnown RBP8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 SEBOXQ9HB31 216 aaPredicted RBP8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 G6PC2Q9NQR9 355 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 SOHLH2Q9NX45 425 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 VDAC3Q9Y277 283 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 TMEM184BQ9Y519 407 aaPredicted RBP8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 RHPN2P1A8MT19 583 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 ADARB2-AS1A8MUL3 147 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 NUDT19A8MXV4 375 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 WRBO00258 174 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 PRF1P14222 555 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF708P17019 499 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 OMGP23515 440 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 GPX4P36969 197 aaPredicted RBP8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 SULT1A2P50226 295 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 EMC4Q5J8M3 183 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 GFI1BQ5VTD9 330 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 FAM180AQ6UWF9 173 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 P4HA3Q7Z4N8 544 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 GKN2Q86XP6 184 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 WDFY1Q8IWB7 410 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 OR51T1Q8NGJ9 327 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 ELSPBP1Q96BH3 223 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 RTBDNQ9BSG5 229 aaPredicted RBP8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 PLA2G2FQ9BZM2 168 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 TMPRSS5Q9H3S3 457 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 TBX21Q9UL17 535 aa8.74□□□□□ -1.01
PTCHD4-202ENST00000398738 LINC01553A4QN01 128 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 TNFSF14O43557 240 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 HOXB4P17483 251 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 RGS19P49795 217 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 FBXW4P57775 412 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 FXYD4P59646 89 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 EIF5AP63241 154 aaKnown RBP8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 OR5D14Q8NGL3 314 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 MRPL24Q96A35 216 aaKnown RBP8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 BMFQ96LC9 184 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 CLUHP3Q96NS8 147 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 AQP10Q96PS8 301 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 TMEM59Q9BXS4 323 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 RAB18Q9NP72 206 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 TIMM10BQ9Y5J6 103 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 B3GALT1Q9Y5Z6 326 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 TRAV36DV7A0A075B6V5 113 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 TRBV6-7A0A0A0MS04 114 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 TMED7-TICAM2A0A0A6YYA0 188 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 NPIPA5E9PKD4 350 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 CST4P01036 141 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms