RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 A8MU76 341 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 IFNL4K9M1U5 179 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 GOSR1O95249 250 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 RAC2P15153 192 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 MDH2P40926 338 aaKnown RBP5.14□□□□□ -1.59
PTPRD-206ENST00000397617 CD200P41217 278 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 OR3A2P47893 321 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 CLDN6P56747 220 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 C2orf76Q3KRA6 126 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 TBRG1Q3YBR2 411 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 SPIN3Q5JUX0 258 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 ROBO4Q8WZ75 1007 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 SYT3Q9BQG1 590 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 TOLLIPQ9H0E2 274 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 ZNF160Q9HCG1 818 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 HRASLSQ9HDD0 168 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 GTF2A1LQ9UNN4 478 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 TM4SF5O14894 197 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 CDS2O95674 445 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 MRPL3P09001 348 aaKnown RBP5.14□□□□□ -1.59
PTPRD-206ENST00000397617 PPP3CBP16298 524 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 HIST1H1DP16402 221 aaKnown RBP5.14□□□□□ -1.59
PTPRD-206ENST00000397617 LHX2P50458 406 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 RPS23P62266 143 aaKnown RBP5.14□□□□□ -1.59
PTPRD-206ENST00000397617 UPRTQ96BW1 309 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 LAMP3Q9UQV4 416 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 PRR32B1ATL7 298 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 APOL3O95236 402 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 PTGFRP43088 359 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 C19orf57Q0VDD7 668 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 CFAP46Q8IYW2 2715 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 FOXI3A8MTJ6 420 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-206ENST00000397617 C11orf98E9PRG8 122 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 M0R233 179 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 TFECO14948 347 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-206ENST00000397617 EEF1E1O43324 174 aaKnown RBP5.14□□□□□ -1.59
PTPRD-206ENST00000397617 SYNGR3O43761 229 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 IFNA6P05013 189 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 PSKH1P11801 424 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 OR8G1Q15617 311 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 Q6ZT83 130 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 COMMD2Q86X83 199 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 ZFP41Q8N8Y5 198 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 GATSQ8NAP1 163 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 SEMA6DQ8NFY4 1073 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 SYNPRQ8TBG9 265 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 SMAD5Q99717 465 aaKnown RBP5.14□□□□□ -1.59
PTPRD-206ENST00000397617 hCG_38984A0A1B0GV85 526 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 CDC14CA4D256 554 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 ITGB1BP1O14713 200 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 PDCD6O75340 191 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 ZNF260Q3ZCT1 412 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 OVCH2Q7RTZ1 564 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 LSRQ86X29 649 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-206ENST00000397617 OR6K3Q8NGY3 331 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 HSD17B8Q92506 261 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 RNF167Q9H6Y7 350 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 GPR84Q9NQS5 396 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 MED29Q9NX70 200 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 FLNCQ14315 2725 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 LCATP04180 440 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 GAPDHP04406 335 aaKnown RBP5.14□□□□□ -1.59
PTPRD-206ENST00000397617 EIF4EP06730 217 aaKnown RBP5.14□□□□□ -1.59
PTPRD-206ENST00000397617 VSIG8P0DPA2 414 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 SLC25A4P12235 298 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 SNRPBP14678 240 aaKnown RBP5.14□□□□□ -1.59
PTPRD-206ENST00000397617 BTCP35070 178 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 SLC25A42Q86VD7 318 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 ZNF573Q86YE8 665 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 PRR22Q8IZ63 422 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 METTL27Q8N6F8 245 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-206ENST00000397617 LAMA3Q16787 3333 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 TMEM82A0PJX8 343 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 TMEM210A6NLX4 147 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 PAHP00439 452 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 CLUP10909 449 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 SLC25A6P12236 298 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 DNASE1P24855 282 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 CDK2P24941 298 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 OC90Q02509 493 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-206ENST00000397617 FAM27D1Q5T7N8 215 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 DHRS13Q6UX07 377 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 Q6ZS92 163 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 JAGN1Q8N5M9 183 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 ZNF283Q8N7M2 679 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 CDCP1Q9H5V8 836 aa5.14□□□□□ -1.59
PTPRD-206ENST00000397617 ABCA12Q86UK0 2595 aa5.13□□□□□ -1.59
PTPRD-206ENST00000397617 GNG2P59768 71 aa5.13□□□□□ -1.59
PTPRD-206ENST00000397617 RND3P61587 244 aa5.13□□□□□ -1.59
PTPRD-206ENST00000397617 SLC25A35Q3KQZ1 300 aa5.13□□□□□ -1.59
PTPRD-206ENST00000397617 OR52I2Q8NH67 350 aa5.13□□□□□ -1.59
PTPRD-206ENST00000397617 PPP1R35Q8TAP8 253 aa5.13□□□□□ -1.59
PTPRD-206ENST00000397617 RAB3CQ96E17 227 aa5.13□□□□□ -1.59
PTPRD-206ENST00000397617 Q96M66 194 aa5.13□□□□□ -1.59
PTPRD-206ENST00000397617 GPR35Q9HC97 309 aa5.13□□□□□ -1.59
PTPRD-206ENST00000397617 RAB18Q9NP72 206 aa5.13□□□□□ -1.59
PTPRD-206ENST00000397617 RCC2Q9P258 522 aaKnown RBP5.13□□□□□ -1.59
PTPRD-206ENST00000397617 H3BML4 177 aa5.13□□□□□ -1.59
PTPRD-206ENST00000397617 TAAR5O14804 337 aa5.13□□□□□ -1.59
PTPRD-206ENST00000397617 MMP9P14780 707 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms