RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 RAB6AP20340 208 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 BDKRB2P30411 391 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 OTX1P32242 354 aaPredicted RBP12.93□□□□□ -0.34
CAPN3-207ENST00000397200 CX3CR1P49238 355 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 PCBD1P61457 104 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 SSBP1Q04837 148 aaKnown RBP12.93□□□□□ -0.34
CAPN3-207ENST00000397200 CDSNQ15517 529 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 ZFP69Q49AA0 526 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 GLYATL3Q5SZD4 288 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 DPPA2Q7Z7J5 298 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 CCDC36Q8IYA8 594 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 AKAP1Q92667 903 aaKnown RBP eCLIP12.93□□□□□ -0.34
CAPN3-207ENST00000397200 FGGYQ96C11 551 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 FBXO17Q96EF6 278 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 ADAT3Q96EY9 351 aaPredicted RBP12.93□□□□□ -0.34
CAPN3-207ENST00000397200 ZNF486Q96H40 463 aaPredicted RBP12.93□□□□□ -0.34
CAPN3-207ENST00000397200 KCNK15Q9H427 330 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 RANGRFQ9HD47 186 aaPredicted RBP12.93□□□□□ -0.34
CAPN3-207ENST00000397200 DIABLOQ9NR28 239 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 KLK11Q9UBX7 282 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 MTFP1Q9UDX5 166 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 CGGBP1Q9UFW8 167 aaPredicted RBP12.93□□□□□ -0.34
CAPN3-207ENST00000397200 A8MV72 311 aaPredicted RBP12.92□□□□□ -0.34
CAPN3-207ENST00000397200 GMDSO60547 372 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 HLA-HP01893 362 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 CD79AP11912 226 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 PLA2G2AP14555 144 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 TMEM255AQ5JRV8 349 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 CDH26Q8IXH8 852 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 GJC3Q8NFK1 279 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 OR1M1Q8NGA1 313 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 OR56B4Q8NH76 319 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 RNASE6Q93091 150 aaKnown RBP12.92□□□□□ -0.34
CAPN3-207ENST00000397200 S100PBPQ96BU1 408 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 SORCS2Q96PQ0 1159 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 FYTTD1Q96QD9 318 aaKnown RBP12.92□□□□□ -0.34
CAPN3-207ENST00000397200 UQCC2Q9BRT2 126 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 ACTR6Q9GZN1 396 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 METTL17Q9H7H0 456 aaPredicted RBP12.92□□□□□ -0.34
CAPN3-207ENST00000397200 TMEM138Q9NPI0 162 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 ZNF224Q9NZL3 707 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 ZNF319Q9P2F9 582 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 FBLN5Q9UBX5 448 aa12.92□□□□□ -0.34
CAPN3-207ENST00000397200 PAIP2BQ9ULR5 123 aaKnown RBP12.92□□□□□ -0.34
CAPN3-207ENST00000397200 A0A0A6YYJ9 748 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 OR5H1A6NKK0 313 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 SULT1C2O00338 296 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 KDM4BO94953 1096 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 AGFG2O95081 481 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 PATE4P0C8F1 98 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 PTHLHP12272 177 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 ZNF32P17041 273 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 CCR6P51684 374 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 NKX2-5P52952 324 aaPredicted RBP12.91□□□□□ -0.34
CAPN3-207ENST00000397200 RAB25P57735 213 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 SPOCK1Q08629 439 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 SCRN3Q0VDG4 424 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 TAF13Q15543 124 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 CCDC92Q53HC0 331 aaPredicted RBP12.91□□□□□ -0.34
CAPN3-207ENST00000397200 TMEM53Q6P2H8 277 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 FGFBP3Q8TAT2 258 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 OR51E1Q8TCB6 317 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 USB1Q9BQ65 265 aaKnown RBP12.91□□□□□ -0.34
CAPN3-207ENST00000397200 OBP2BQ9NPH6 170 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 MCUBQ9NWR8 336 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 AMDHD2Q9Y303 409 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 TIMM10BQ9Y5J6 103 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 TRAV6A0A075B6T7 132 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 A0A1W2PR80 420 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 J3QKU1 62 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 MMP7P09237 267 aaPredicted RBP12.91□□□□□ -0.34
CAPN3-207ENST00000397200 H2AFB2P0C5Z0 115 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 ANOS1P23352 680 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 CCKARP32238 428 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 ARR3P36575 388 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 MECP2P51608 486 aaKnown RBP12.91□□□□□ -0.34
CAPN3-207ENST00000397200 PRKXP51817 358 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 GSG1Q2KHT4 349 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 TIMM23BQ5SRD1 257 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 DOK3Q7L591 496 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 OR4D6Q8NGJ1 314 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 OR5D14Q8NGL3 314 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 C20orf85Q9H1P6 137 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 OR10A4Q9H209 315 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 TAS2R8Q9NYW2 309 aa12.91□□□□□ -0.34
CAPN3-207ENST00000397200 A0A0U1RQV5 110 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 ZNF503-AS2A6NEH8 195 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 BPNT1O95861 308 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 ALDOBP05062 364 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 ERCC1P07992 297 aaPredicted RBP12.9□□□□□ -0.34
CAPN3-207ENST00000397200 RAB3AP20336 220 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 RAB1AP62820 205 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 QRFPP83859 136 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 CD83Q01151 205 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 CD276Q5ZPR3 534 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 PGAP1Q75T13 922 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 NOXA1Q86UR1 476 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 OR5AS1Q8N127 324 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 JAGN1Q8N5M9 183 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 WDR31Q8NA23 367 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms