RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 PLSCR3Q9NRY6 295 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM238LA0A1B0GVL6 79 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 ZC3H12DA2A288 527 aaKnown RBP9.37□□□□□ -0.91
COL4A4-201ENST00000396625 A6NJY4 79 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 H3BP45 60 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 B4GALT3O60512 393 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 IL10RAQ13651 578 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 CTSCP53634 463 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 EGR3Q06889 387 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 PRDX4Q13162 271 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 LMO3Q8TAP4 145 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 NUDCD2Q8WVJ2 157 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 PAM16Q9Y3D7 125 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 SIGLEC6O43699 453 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 CD3DP04234 171 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 CSN3P07498 182 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 APOBEC1P41238 236 aaKnown RBP9.36□□□□□ -0.91
COL4A4-201ENST00000396625 SUCLG1P53597 346 aaKnown RBP9.36□□□□□ -0.91
COL4A4-201ENST00000396625 DLX1P56177 255 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 GLIPR2Q9H4G4 154 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 MANBALQ9NQG1 85 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 A0A1B0GTW7 788 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 CDK2AP1O14519 115 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 GPR137Q96N19 417 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 ZNF583Q96ND8 569 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 MIEN1Q9BRT3 115 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 PCNX1Q96RV3 2341 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 TRGV10A0A0A0MS01 117 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 DNASE2O00115 360 aaPredicted RBP9.36□□□□□ -0.91
COL4A4-201ENST00000396625 OPN1MWP04001 364 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 RNF224P0DH78 156 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 OPN1MW2P0DN77 364 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 OPN1MW3P0DN78 364 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 FABP2P12104 132 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 HIST1H1CP16403 213 aaKnown RBP9.36□□□□□ -0.91
COL4A4-201ENST00000396625 ADIPOQQ15848 244 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM81Q6P7N7 255 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 MOGAT1Q96PD6 335 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 AUNIPQ9H7T9 357 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 ST3GAL6Q9Y274 331 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 M0R135 149 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 FGF8P55075 233 aaPredicted RBP9.36□□□□□ -0.91
COL4A4-201ENST00000396625 FCRL6Q6DN72 434 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 ZNF799Q96GE5 643 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 WSB1Q9Y6I7 421 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 ARFGEF1Q9Y6D6 1849 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 ARSAP15289 507 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 GP2P55259 537 aaKnown RBP9.36□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM102Q8N9M5 508 aaPredicted RBP9.36□□□□□ -0.91
COL4A4-201ENST00000396625 SLAMF6Q96DU3 332 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 COL1A1P02452 1464 aaPredicted RBP9.36□□□□□ -0.91
COL4A4-201ENST00000396625 PPP6CO00743 305 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 EMP1P54849 157 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 HNRNPA1L2Q32P51 320 aaKnown RBP9.36□□□□□ -0.91
COL4A4-201ENST00000396625 SLC16A13Q7RTY0 426 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 HDAC8Q9BY41 377 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 TOGARAM1Q9Y4F4 1720 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 LRRK1Q38SD2 2015 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 MFNGO00587 321 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 DCTDP32321 178 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 PLP1P60201 277 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 RHOBP62745 196 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 GPNMBQ14956 572 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 HLA-BQ31612 363 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 CGB2Q6NT52 195 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 TOPAZ1Q8N9V7 1692 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 CD38P28907 300 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 TNFRSF4P43489 277 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 HAAOP46952 286 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 CTU2Q2VPK5 515 aaKnown RBP9.36□□□□□ -0.91
COL4A4-201ENST00000396625 FAM78BQ5VT40 261 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 TP53INP2Q8IXH6 220 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 SLC25A43Q8WUT9 341 aaPredicted RBP9.36□□□□□ -0.91
COL4A4-201ENST00000396625 NEIL1Q96FI4 390 aaPredicted RBP9.36□□□□□ -0.91
COL4A4-201ENST00000396625 CXorf36Q9H7Y0 433 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 TIMM10BQ9Y5J6 103 aa9.36□□□□□ -0.91
COL4A4-201ENST00000396625 PRKRAO75569 313 aaKnown RBP9.35□□□□□ -0.91
COL4A4-201ENST00000396625 SIGIRRQ6IA17 410 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 DND1Q8IYX4 353 aaKnown RBP9.35□□□□□ -0.91
COL4A4-201ENST00000396625 LILRA2Q8N149 483 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 NXPE3Q969Y0 559 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 PCYT2Q99447 389 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 ATP23Q9Y6H3 246 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 IFITM5A6NNB3 132 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 ZNF195O14628 629 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 GPANK1O95872 356 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 SDHBP21912 280 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 PRDX1Q06830 199 aaKnown RBP9.35□□□□□ -0.91
COL4A4-201ENST00000396625 AGBL5Q8NDL9 886 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 SLCO4A1Q96BD0 722 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 SPACA9Q96E40 222 aaPredicted RBP9.35□□□□□ -0.91
COL4A4-201ENST00000396625 ADAT3Q96EY9 351 aaPredicted RBP9.35□□□□□ -0.91
COL4A4-201ENST00000396625 CD207Q9UJ71 328 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 OR51B4Q9Y5P0 310 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 MAP1LC3B2A6NCE7 125 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 GJB3O75712 270 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM128Q5BJH2 165 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 OR1B1Q8NGR6 318 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 MAP1LC3BQ9GZQ8 125 aa9.35□□□□□ -0.91
COL4A4-201ENST00000396625 SLC45A2Q9UMX9 530 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms