RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 LILRA3Q8N6C8 439 aaPredicted RBP12.62□□□□□ -0.39
COL4A3-202ENST00000396578 TRAV34A0A0B4J273 112 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 PCBP3P57721 371 aaKnown RBP12.62□□□□□ -0.39
COL4A3-202ENST00000396578 FDX2Q6P4F2 183 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 MYPOPQ86VE0 399 aaPredicted RBP12.62□□□□□ -0.39
COL4A3-202ENST00000396578 PLPP6Q8IY26 295 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 EIF4E3Q8N5X7 224 aaKnown RBP12.62□□□□□ -0.39
COL4A3-202ENST00000396578 SLCO1C1Q9NYB5 712 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 OR51B4Q9Y5P0 310 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 MDC1Q14676 2089 aaKnown RBP12.62□□□□□ -0.39
COL4A3-202ENST00000396578 PRRG2O14669 202 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 C6orf15Q6UXA7 325 aaPredicted RBP12.62□□□□□ -0.39
COL4A3-202ENST00000396578 IGLV3-10A0A075B6K4 115 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 PGA3P0DJD8 388 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 Q6ZN92 141 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 NTNG2Q96CW9 530 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 ESRP2Q9H6T0 727 aaKnown RBP12.62□□□□□ -0.39
COL4A3-202ENST00000396578 FPR2P25090 351 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 MORN4Q8NDC4 146 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 OR1A1Q9P1Q5 309 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 STUMQ69YW2 141 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 FAAP24Q9BTP7 215 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 TMEM147Q9BVK8 224 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 PROCRQ9UNN8 238 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 TCRBV5S2A0A599 114 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 NEURL1O76050 574 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 ANKRD34CP0C6C1 535 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 HTR1DP28221 377 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 PPOXP50336 477 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 DUSP2Q05923 314 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 KCNAB1Q14722 419 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 PAQR9Q6ZVX9 377 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 DEFB108BQ8NET1 73 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 EDEM2Q9BV94 578 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 CRYAAP02489 173 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 AREGP15514 252 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 BMP5P22003 454 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 RPL29P47914 159 aaKnown RBP12.61□□□□□ -0.39
COL4A3-202ENST00000396578 ACSM6Q6P461 480 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 CALHM3Q86XJ0 350 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.61□□□□□ -0.39
COL4A3-202ENST00000396578 ZPBPQ9BS86 351 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 SLC25A37Q9NYZ2 338 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 TMED3Q9Y3Q3 217 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 DOCK2Q92608 1830 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 A0A1W2PNR3 127 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 K7ESM1 405 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 TTRP02766 147 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 FBXO46Q6PJ61 603 aaPredicted RBP12.61□□□□□ -0.39
COL4A3-202ENST00000396578 MAMSTRQ6ZN01 415 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 UNC13CQ8NB66 2214 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 SNRPEP62304 92 aaKnown RBP12.61□□□□□ -0.39
COL4A3-202ENST00000396578 PPIAP62937 165 aaKnown RBP12.61□□□□□ -0.39
COL4A3-202ENST00000396578 SLC25A35Q3KQZ1 300 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 ADPRHL1Q8NDY3 354 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 OR10C1Q96KK4 312 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 ADAT1Q9BUB4 502 aaKnown RBP12.61□□□□□ -0.39
COL4A3-202ENST00000396578 WSB1Q9Y6I7 421 aa12.61□□□□□ -0.39
COL4A3-202ENST00000396578 ZNF737O75373 536 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 OPRK1P41145 380 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 FOXB2Q5VYV0 432 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 LRP11Q86VZ4 500 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 VN1R2Q8NFZ6 395 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 MRGPRX4Q96LA9 322 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 TMEM56Q96MV1 263 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 UBE2ZQ9H832 354 aaPredicted RBP12.6□□□□□ -0.39
COL4A3-202ENST00000396578 AP5S1Q9NUS5 200 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 FKBP11Q9NYL4 201 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 ORM1P02763 201 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 SLC25A5P05141 298 aaKnown RBP12.6□□□□□ -0.39
COL4A3-202ENST00000396578 FAHD1Q6P587 224 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 C17orf99Q6UX52 265 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 OR4F17Q8NGA8 305 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 PRO1933Q9H354 126 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 UQCC1Q9NVA1 299 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 MCM3APO60318 1980 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 CLDN34H7C241 214 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 GPANK1O95872 356 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 ELFN2Q5R3F8 820 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 PP6455Q8WZ26 134 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 FAM210BQ96KR6 192 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 IGHV3-15A0A0B4J1V0 119 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 IGFBP7Q16270 282 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 IP6K3Q96PC2 410 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 RBP4P02753 201 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 RIMKLAQ8IXN7 391 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 WBP2Q969T9 261 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 SLC22A13Q9Y226 551 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 TP53BP1Q12888 1972 aaPredicted RBP12.6□□□□□ -0.39
COL4A3-202ENST00000396578 TMEM30CPA0ZSE6 113 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 IL2RAP01589 272 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 OR2W3Q7Z3T1 314 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 OR1L4Q8NGR5 311 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 HES7Q9BYE0 225 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 SLC17A5Q9NRA2 495 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 C5orf52A6NGY3 159 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 GFYI3L273 518 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 PRDX4Q13162 271 aa12.6□□□□□ -0.39
COL4A3-202ENST00000396578 KLF13Q9Y2Y9 288 aaPredicted RBP12.6□□□□□ -0.39
COL4A3-202ENST00000396578 THBS4P35443 961 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms