RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 TCTE3Q8IZS6 198 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 CISD2Q8N5K1 135 aaKnown RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 OR2M3Q8NG83 312 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 OR5A2Q8NGI9 324 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 TSPAN32Q96QS1 320 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 OCSTAMPQ9BR26 566 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 PBDC1Q9BVG4 233 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 GSX2Q9BZM3 304 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 CALHM2Q9HA72 323 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 FAM212BQ9NTI7 297 aaPredicted RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 TP53TG5Q9Y2B4 290 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 USP24Q9UPU5 2620 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 ACSM4P0C7M7 580 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 COX6A1P12074 109 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 ERVK-16P61578 105 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM200AQ86VY9 491 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 ZFP62Q8NB50 900 aaPredicted RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM38BQ9NVV0 291 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 KRBOX1C9JBD0 128 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 SLC33A1O00400 549 aaPredicted RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 ST8SIA3O43173 380 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 TAGLN2P37802 199 aaKnown RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 F2RL1P55085 397 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 CLDN20P56880 219 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 PCOLCEQ15113 449 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 TSC22D1Q15714 1073 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF239Q16600 458 aaKnown RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF546Q86UE3 836 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 ZDHHC23Q8IYP9 409 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 C12orf45Q8N5I9 185 aaPredicted RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 WNT2BQ93097 391 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 LINC00470Q9BZP3 86 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 ESRP2Q9H6T0 727 aaKnown RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 ISG20L2Q9H9L3 353 aaKnown RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 DLL4Q9NR61 685 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 CHST2Q9Y4C5 530 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 COL5A1P20908 1838 aaPredicted RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM229AB2RXF0 380 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 F5H5P2 479 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 H7C1C5 153 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 DUS4LO95620 317 aaKnown RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 SERPINA2P20848 420 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 MESTQ5EB52 335 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 NHLRC1Q6VVB1 395 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 CDC20BQ86Y33 519 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 OSR2Q8N2R0 312 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 LILRB1Q8NHL6 650 aaPredicted RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 TIMD4Q96H15 378 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 RNF170Q96K19 258 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 A6NL46 340 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 MSTNO14793 375 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 RER1O15258 196 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 GSTZ1O43708 216 aaPredicted RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 LALBAP00709 142 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 SNRPBP14678 240 aaKnown RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 WDR38Q5JTN6 314 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 OR2M7Q8NG81 312 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 GIMAP1Q8WWP7 306 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 SUCNR1Q9BXA5 334 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 MFFQ9GZY8 342 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 MS4A5Q9H3V2 200 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 RDH8Q9NYR8 311 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 ATRQ13535 2644 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 IFNL4K9M1U5 179 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 SH2D1BO14796 132 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 NDUFA2O43678 99 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 TRAF3IP2O43734 574 aaPredicted RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 CTAG2O75638 210 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 SLC51BQ86UW2 128 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 REEP6Q96HR9 211 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF471Q9BX82 626 aaPredicted RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 NEUROG3Q9Y4Z2 214 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 FAM230AA0A1W2PPH8 454 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 C5orf49A4QMS7 147 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 HTR3BO95264 441 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 BGLAPP02818 100 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 PGA3P0DJD8 388 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 B4GALT1P15291 398 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 KIR2DL3P43628 341 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 LYPD4Q6UWN0 246 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 ARSKQ6UWY0 536 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 KANSL1Q7Z3B3 1105 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 MDGA2Q7Z553 956 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF695Q8IW36 515 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 LGI3Q8N145 548 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 ZBTB34Q8NCN2 500 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 LFNGQ8NES3 379 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 BBS1Q8NFJ9 593 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 CORO2AQ92828 525 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 MRM2Q9UI43 246 aaKnown RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 C13orf42A0A1B0GVH6 325 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 TUBAL3A6NHL2 446 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM210A6NLX4 147 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 TNFSF11O14788 317 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 TIMM8AO60220 97 aaPredicted RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 CSN2P05814 226 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 AKR1C4P17516 323 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 BLOC1S1P78537 153 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 GABRA6Q16445 453 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 LINC01590Q5TEZ4 76 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms