RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 OR8U9P0C7N5 309 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 HTR2CP28335 458 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 LPAR6P43657 344 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 RNASE10Q5GAN6 216 aaKnown RBP13.75□□□□□ -0.21
PTBP1-204ENST00000394601 LINC00346Q8IVM7 164 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 OR8U1Q8NH10 309 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 OR51F2Q8NH61 342 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 RRNAD1Q96FB5 475 aaKnown RBP13.75□□□□□ -0.21
PTBP1-204ENST00000394601 MRPL13Q9BYD1 178 aaKnown RBP13.75□□□□□ -0.21
PTBP1-204ENST00000394601 CRLF2Q9HC73 371 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 C1QL1O75973 258 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 QRFPP83859 136 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 SSBP1Q04837 148 aaKnown RBP13.75□□□□□ -0.21
PTBP1-204ENST00000394601 RSU1Q15404 277 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 GFI1BQ5VTD9 330 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 RPL7L1Q6DKI1 246 aaKnown RBP13.75□□□□□ -0.21
PTBP1-204ENST00000394601 HIST2H3AQ71DI3 136 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 PAQR4Q8N4S7 273 aaPredicted RBP13.75□□□□□ -0.21
PTBP1-204ENST00000394601 OR4D6Q8NGJ1 314 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 RNF133Q8WVZ7 376 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 MRGPRFQ96AM1 343 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 MARS2Q96GW9 593 aaKnown RBP13.75□□□□□ -0.21
PTBP1-204ENST00000394601 TAS2R8Q9NYW2 309 aa13.75□□□□□ -0.21
PTBP1-204ENST00000394601 RCC2Q9P258 522 aaKnown RBP13.75□□□□□ -0.21
PTBP1-204ENST00000394601 EML6Q6ZMW3 1958 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 LOC107986453A0A1B0GWG9 222 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 LIPT2A6NK58 231 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 K7ESF4 209 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 SLC33A1O00400 549 aaPredicted RBP13.74□□□□□ -0.21
PTBP1-204ENST00000394601 ATXN7O15265 892 aaPredicted RBP13.74□□□□□ -0.21
PTBP1-204ENST00000394601 MDKP21741 143 aaPredicted RBP13.74□□□□□ -0.21
PTBP1-204ENST00000394601 FHITP49789 147 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 FOXF1Q12946 379 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 SLC25A53Q5H9E4 307 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 Q6ZRG5 221 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 H1FNTQ75WM6 255 aaPredicted RBP13.74□□□□□ -0.21
PTBP1-204ENST00000394601 ZNF584Q8IVC4 421 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 UBAC2Q8NBM4 344 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 SLC25A43Q8WUT9 341 aaPredicted RBP13.74□□□□□ -0.21
PTBP1-204ENST00000394601 CYYR1Q96J86 154 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 ZNF727A8MUV8 499 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 H2AFB1P0C5Y9 115 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 APOBEC1P41238 236 aaKnown RBP13.74□□□□□ -0.21
PTBP1-204ENST00000394601 AFF3P51826 1226 aaKnown RBP13.74□□□□□ -0.21
PTBP1-204ENST00000394601 SURF2Q15527 256 aaPredicted RBP13.74□□□□□ -0.21
PTBP1-204ENST00000394601 CDCP2Q5VXM1 449 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 PAPD4Q6PIY7 484 aaKnown RBP13.74□□□□□ -0.21
PTBP1-204ENST00000394601 UQCC3Q6UW78 93 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 ZNF813Q6ZN06 617 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 PGAP1Q75T13 922 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 THAP3Q8WTV1 239 aaPredicted RBP13.74□□□□□ -0.21
PTBP1-204ENST00000394601 MITD1Q8WV92 249 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 SLC25A44Q96H78 314 aaPredicted RBP13.74□□□□□ -0.21
PTBP1-204ENST00000394601 SEC11CQ9BY50 192 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 OR52A1Q9UKL2 312 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 WASF3Q9UPY6 502 aa13.74□□□□□ -0.21
PTBP1-204ENST00000394601 PHOX2AO14813 284 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 BCAT2O15382 392 aaPredicted RBP13.73□□□□□ -0.21
PTBP1-204ENST00000394601 TNFSF12O43508 249 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 OR6A2O95222 327 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 HSF1Q00613 529 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 C17orf67Q0P5P2 114 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 GAMTQ14353 236 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 OR14K1Q8NGZ2 314 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 PIK3IP1Q96FE7 263 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 PHB2Q99623 299 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 UBE2ZQ9H832 354 aaPredicted RBP13.73□□□□□ -0.21
PTBP1-204ENST00000394601 VSIG4Q9Y279 399 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 IGLV3-32A0A0A0MS00 114 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 A0A1W2PNV4 684 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 VSTM2BA6NLU5 285 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 ONECUT2O95948 504 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 CD74P04233 296 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 FBP1P09467 338 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 IGFBP4P22692 258 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 ACKR3P25106 362 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 FOXK1P85037 733 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 KIRREL1Q96J84 757 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 SPACA5Q96QH8 159 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 EDEM2Q9BV94 578 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 ALX4Q9H161 411 aaPredicted RBP13.73□□□□□ -0.21
PTBP1-204ENST00000394601 CHST11Q9NPF2 352 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 DNAJB11Q9UBS4 358 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 KLK13Q9UKR3 277 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 RAB5AP20339 215 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 PSMB6P28072 239 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 NPY4RP50391 375 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 ASCL1P50553 236 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 MMP16P51512 607 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 RNF144BQ7Z419 303 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 RTN4RL2Q86UN3 420 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 C17orf78Q8N4C9 275 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 MARCH1Q8TCQ1 289 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 GFOD1Q9NXC2 390 aa13.73□□□□□ -0.21
PTBP1-204ENST00000394601 RALGAPA1Q6GYQ0 2036 aa13.72□□□□□ -0.21
PTBP1-204ENST00000394601 A0A1W2PQM1 296 aa13.72□□□□□ -0.21
PTBP1-204ENST00000394601 BTBD17A6NE02 478 aa13.72□□□□□ -0.21
PTBP1-204ENST00000394601 ZNF729A6NN14 1252 aaPredicted RBP13.72□□□□□ -0.21
PTBP1-204ENST00000394601 SUMO3P55854 103 aaPredicted RBP13.72□□□□□ -0.21
PTBP1-204ENST00000394601 DEGS2Q6QHC5 323 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms