RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 ZP1P60852 638 aa12.95□□□□□ -0.34
CCT4-201ENST00000394440 PLP2Q04941 152 aa12.95□□□□□ -0.34
CCT4-201ENST00000394440 CLVS2Q5SYC1 327 aa12.95□□□□□ -0.34
CCT4-201ENST00000394440 ZBTB37Q5TC79 503 aa12.95□□□□□ -0.34
CCT4-201ENST00000394440 VWA1Q6PCB0 445 aa12.95□□□□□ -0.34
CCT4-201ENST00000394440 INO80CQ6PI98 192 aaPredicted RBP12.95□□□□□ -0.34
CCT4-201ENST00000394440 SEM1Q6ZVN7 128 aa12.95□□□□□ -0.34
CCT4-201ENST00000394440 C1QL2Q7Z5L3 287 aa12.95□□□□□ -0.34
CCT4-201ENST00000394440 DRAXINQ8NBI3 349 aaPredicted RBP12.95□□□□□ -0.34
CCT4-201ENST00000394440 APOBEC3DQ96AK3 386 aaPredicted RBP12.95□□□□□ -0.34
CCT4-201ENST00000394440 BOD1Q96IK1 185 aa12.95□□□□□ -0.34
CCT4-201ENST00000394440 FAM210AQ96ND0 272 aa12.95□□□□□ -0.34
CCT4-201ENST00000394440 REPIN1Q9BWE0 567 aaKnown RBP12.95□□□□□ -0.34
CCT4-201ENST00000394440 NUDT15Q9NV35 164 aa12.95□□□□□ -0.34
CCT4-201ENST00000394440 TAS2R8Q9NYW2 309 aa12.95□□□□□ -0.34
CCT4-201ENST00000394440 ALG5Q9Y673 324 aa12.95□□□□□ -0.34
CCT4-201ENST00000394440 DMXL2Q8TDJ6 3036 aa12.95□□□□□ -0.34
CCT4-201ENST00000394440 BOD1L1Q8NFC6 3051 aa12.95□□□□□ -0.34
CCT4-201ENST00000394440 A0A1W2PP11 408 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 TMEM8BA6NDV4 472 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 MBD3L4A6NDZ8 208 aaPredicted RBP12.94□□□□□ -0.34
CCT4-201ENST00000394440 MBD3L3A6NE82 208 aaPredicted RBP12.94□□□□□ -0.34
CCT4-201ENST00000394440 HMX3A6NHT5 357 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 MBD3L5A6NJ08 208 aaPredicted RBP12.94□□□□□ -0.34
CCT4-201ENST00000394440 CRYABP02511 175 aaKnown RBP12.94□□□□□ -0.34
CCT4-201ENST00000394440 LPLP06858 475 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 MELTFP08582 738 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 COX5AP20674 150 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 CNN3Q15417 329 aaKnown RBP12.94□□□□□ -0.34
CCT4-201ENST00000394440 PCGF3Q3KNV8 242 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 MBD3L2Q8NHZ7 208 aaPredicted RBP12.94□□□□□ -0.34
CCT4-201ENST00000394440 ABHD17AQ96GS6 310 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 RNF170Q96K19 258 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 NICN1Q9BSH3 213 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 ELF5Q9UKW6 265 aaPredicted RBP12.94□□□□□ -0.34
CCT4-201ENST00000394440 CSF1P09603 554 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 FOXF2Q12947 444 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 GK2Q14410 553 aaPredicted RBP12.94□□□□□ -0.34
CCT4-201ENST00000394440 BTN2A1Q7KYR7 527 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 CDH24Q86UP0 819 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 MDP1Q86V88 176 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 OR5D18Q8NGL1 313 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 OR6F1Q8NGZ6 308 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 CMBLQ96DG6 245 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 MS4A3Q96HJ5 214 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 TMEM59Q9BXS4 323 aa12.94□□□□□ -0.34
CCT4-201ENST00000394440 IGKV1-27A0A075B6S5 117 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 ZNF816-ZNF321PA0A0X1KG74 233 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 TMEM235A6NFC5 223 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 TNFSF13O75888 250 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 MPIG6BO95866 241 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 CHRM2P08172 466 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 CCNOP22674 350 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 PRKACBP22694 351 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 VEGFCP49767 419 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 RAG2P55895 527 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 ACTBP60709 375 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 ACTG1P63261 375 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 TGFBR3Q03167 851 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 GABRA6Q16445 453 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 ZNF585AQ6P3V2 769 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 CNEP1R1Q8N9A8 125 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 OR10R2Q8NGX6 335 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 TNFAIP8L1Q8WVP5 186 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 ZMAT3Q9HA38 289 aaKnown RBP12.93□□□□□ -0.34
CCT4-201ENST00000394440 C7orf66A4D0T2 115 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 NRASP01111 189 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 SERPINA5P05154 406 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 ZNF324BQ6AW86 544 aaPredicted RBP12.93□□□□□ -0.34
CCT4-201ENST00000394440 RTL6Q6ICC9 239 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 FAAP20Q6NZ36 180 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 Q6ZTK2 550 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 FAM89BQ8N5H3 189 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 KDF1Q8NAX2 398 aaPredicted RBP12.93□□□□□ -0.34
CCT4-201ENST00000394440 ZCCHC14Q8WYQ9 949 aaKnown RBP12.93□□□□□ -0.34
CCT4-201ENST00000394440 CST11Q9H112 138 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 BANF2Q9H503 90 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 PLSCR4Q9NRQ2 329 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 LUZP4Q9P127 313 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 TP53TG5Q9Y2B4 290 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 PTPRQQ9UMZ3 2332 aa12.93□□□□□ -0.34
CCT4-201ENST00000394440 TRAV6A0A075B6T7 132 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 MEIS3P1A6NDR6 274 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 RAD51DO75771 328 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 NGFP01138 241 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 ZNF14P17017 642 aaPredicted RBP12.92□□□□□ -0.34
CCT4-201ENST00000394440 WNT5AP41221 380 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 RPS27AP62979 156 aaKnown RBP12.92□□□□□ -0.34
CCT4-201ENST00000394440 TBR1Q16650 682 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 SFRP4Q6FHJ7 346 aaPredicted RBP12.92□□□□□ -0.34
CCT4-201ENST00000394440 CCDC36Q8IYA8 594 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 GABRG1Q8N1C3 465 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 OR4C16Q8NGL9 310 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 TECTBQ96PL2 329 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 ZNF107Q9UII5 783 aaPredicted RBP12.92□□□□□ -0.34
CCT4-201ENST00000394440 STARD10Q9Y365 291 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 FOXI3A8MTJ6 420 aaPredicted RBP12.92□□□□□ -0.34
CCT4-201ENST00000394440 CCNKO75909 580 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 LYZL6O75951 148 aa12.92□□□□□ -0.34
CCT4-201ENST00000394440 CGAP01215 116 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms