RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 CHD8Q9HCK8 2581 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 IGF2RP11717 2491 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 DOCK7Q96N67 2140 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 ZNF816-ZNF321PA0A0X1KG74 233 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 MPIG6BO95866 241 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 NRASP01111 189 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 FAUP35544 74 aaKnown RBP18.49■□□□□ 0.55
SPHK1-202ENST00000392496 CCR6P51684 374 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 RAG2P55895 527 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 MALLQ13021 153 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 DRAXINQ8NBI3 349 aaPredicted RBP18.49■□□□□ 0.55
SPHK1-202ENST00000392496 TMEM104Q8NE00 496 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 OR10R2Q8NGX6 335 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 TNFAIP8L1Q8WVP5 186 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 ZNF75AQ96N20 296 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 REPIN1Q9BWE0 567 aaKnown RBP18.49■□□□□ 0.55
SPHK1-202ENST00000392496 TMEM59Q9BXS4 323 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 NUDT15Q9NV35 164 aa18.49■□□□□ 0.55
SPHK1-202ENST00000392496 MBD3L4A6NDZ8 208 aaPredicted RBP18.48■□□□□ 0.55
SPHK1-202ENST00000392496 MBD3L3A6NE82 208 aaPredicted RBP18.48■□□□□ 0.55
SPHK1-202ENST00000392496 MBD3L5A6NJ08 208 aaPredicted RBP18.48■□□□□ 0.55
SPHK1-202ENST00000392496 DHFRP00374 187 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 MELTFP08582 738 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 CCL2P13500 99 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 HOXB1P14653 301 aaPredicted RBP18.48■□□□□ 0.55
SPHK1-202ENST00000392496 VEGFCP49767 419 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 DMRTC1Q5HYR2 192 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 LHFPL2Q6ZUX7 228 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 MDP1Q86V88 176 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 MBD3L2Q8NHZ7 208 aaPredicted RBP18.48■□□□□ 0.55
SPHK1-202ENST00000392496 UBASH3BQ8TF42 649 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 ABHD17AQ96GS6 310 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 BOD1Q96IK1 185 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 URM1Q9BTM9 101 aaKnown RBP18.48■□□□□ 0.55
SPHK1-202ENST00000392496 OPA3Q9H6K4 179 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 KCNN3Q9UGI6 736 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 ING4Q9UNL4 249 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 LOC400499M0QZD8 3231 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 FRYQ5TBA9 3013 aa18.48■□□□□ 0.55
SPHK1-202ENST00000392496 WIPF3A6NGB9 483 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 CCNKO75909 580 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 MTCP1P56278 107 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 KRTCAP3Q53RY4 240 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 TMEM255AQ5JRV8 349 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 VWA1Q6PCB0 445 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 Q6ZTK2 550 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 CHST4Q8NCG5 386 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 S100A13Q99584 98 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 ACTR6Q9GZN1 396 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 PLSCR4Q9NRQ2 329 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 ZNF107Q9UII5 783 aaPredicted RBP18.47■□□□□ 0.55
SPHK1-202ENST00000392496 ANKRD11Q6UB99 2663 aaPredicted RBP18.47■□□□□ 0.55
SPHK1-202ENST00000392496 TRAV6A0A075B6T7 132 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 CRTAPO75718 401 aaPredicted RBP18.47■□□□□ 0.55
SPHK1-202ENST00000392496 PTGER4P35408 488 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 ZP1P60852 638 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 CXADRP78310 365 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 GK2Q14410 553 aaPredicted RBP18.47■□□□□ 0.55
SPHK1-202ENST00000392496 GABRA6Q16445 453 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 TBR1Q16650 682 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 CDNFQ49AH0 187 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 SFRP4Q6FHJ7 346 aaPredicted RBP18.47■□□□□ 0.55
SPHK1-202ENST00000392496 C1QL2Q7Z5L3 287 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 OR5D18Q8NGL1 313 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 RNF170Q96K19 258 aa18.47■□□□□ 0.55
SPHK1-202ENST00000392496 TMEM235A6NFC5 223 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 WDR1O75083 606 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 H2AFB2P0C5Z0 115 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 AKAIN1P0CW23 69 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 PSMB1P20618 241 aaKnown RBP18.46■□□□□ 0.55
SPHK1-202ENST00000392496 COX5AP20674 150 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 RBP2P50120 134 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 PRSS12P56730 875 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 UBE2NP61088 152 aaKnown RBP18.46■□□□□ 0.55
SPHK1-202ENST00000392496 RPS27AP62979 156 aaKnown RBP18.46■□□□□ 0.55
SPHK1-202ENST00000392496 SLC22A6Q4U2R8 563 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 TMEM229BQ8NBD8 167 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 C1orf162Q8NEQ5 155 aaPredicted RBP18.46■□□□□ 0.55
SPHK1-202ENST00000392496 OR56B4Q8NH76 319 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 CMBLQ96DG6 245 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 BORCS8Q96FH0 119 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 NICN1Q9BSH3 213 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 BANF2Q9H503 90 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 SLC7A11Q9UPY5 501 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 CACNA1GO43497 2377 aa18.46■□□□□ 0.55
SPHK1-202ENST00000392496 MYO7BQ6PIF6 2116 aa18.45■□□□□ 0.54
SPHK1-202ENST00000392496 A0A0A6YYD4 124 aa18.45■□□□□ 0.54
SPHK1-202ENST00000392496 MEIS3P1A6NDR6 274 aa18.45■□□□□ 0.54
SPHK1-202ENST00000392496 RAD51DO75771 328 aa18.45■□□□□ 0.54
SPHK1-202ENST00000392496 CRHP06850 196 aa18.45■□□□□ 0.54
SPHK1-202ENST00000392496 GTF2F2P13984 249 aa18.45■□□□□ 0.54
SPHK1-202ENST00000392496 FUT6P51993 359 aa18.45■□□□□ 0.54
SPHK1-202ENST00000392496 FAM180AQ6UWF9 173 aa18.45■□□□□ 0.54
SPHK1-202ENST00000392496 MRPL21Q7Z2W9 205 aaKnown RBP18.45■□□□□ 0.54
SPHK1-202ENST00000392496 FAM89BQ8N5H3 189 aa18.45■□□□□ 0.54
SPHK1-202ENST00000392496 SLC30A7Q8NEW0 376 aa18.45■□□□□ 0.54
SPHK1-202ENST00000392496 STEAP2Q8NFT2 490 aa18.45■□□□□ 0.54
SPHK1-202ENST00000392496 OR56B1Q8NGI3 324 aa18.45■□□□□ 0.54
SPHK1-202ENST00000392496 OR6F1Q8NGZ6 308 aa18.45■□□□□ 0.54
SPHK1-202ENST00000392496 ZMAT3Q9HA38 289 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms