RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 PYCARD-AS1I3L0S3 204 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 RLN1P04808 185 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 SOD3P08294 240 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 SPARCP09486 303 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 POLR2HP52434 150 aaKnown RBP16.8■□□□□ 0.28
CCDC50-202ENST00000392456 SUCLG1P53597 346 aaKnown RBP16.8■□□□□ 0.28
CCDC50-202ENST00000392456 SLC25A35Q3KQZ1 300 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 RNF141Q8WVD5 230 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 IP6K3Q96PC2 410 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 MRI1Q9BV20 369 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 SH2D2AQ9NP31 389 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 ZNF337Q9Y3M9 751 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 CA11O75493 328 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 CD74P04233 296 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 SERPINA7P05543 415 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 SNRNP70P08621 437 aaKnown RBP16.79■□□□□ 0.28
CCDC50-202ENST00000392456 CEACAM1P13688 526 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 RPS4XP62701 263 aaKnown RBP16.79■□□□□ 0.28
CCDC50-202ENST00000392456 FOXF1Q12946 379 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 BEX5Q5H9J7 111 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 GLT8D1Q68CQ7 371 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 OR2A2Q6IF42 318 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 CFAP161Q6P656 301 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 THOC3Q96J01 351 aaKnown RBP16.79■□□□□ 0.28
CCDC50-202ENST00000392456 S100A13Q99584 98 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 FN3KRPQ9HA64 309 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 IER3IP1Q9Y5U9 82 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 PRRC2CQ9Y520 2896 aaKnown RBP16.79■□□□□ 0.28
CCDC50-202ENST00000392456 ELOA3CA0A087WX78 387 aaPredicted RBP16.79■□□□□ 0.28
CCDC50-202ENST00000392456 ZNF724A8MTY0 619 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 FAM157AC9JC47 383 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 NPIPB7O75200 414 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 OPN1LWP04000 364 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 CD5P06127 495 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 ASAH2BP0C7U1 165 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 DIO1P49895 249 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 MUC20Q8N307 709 aaPredicted RBP16.79■□□□□ 0.28
CCDC50-202ENST00000392456 HSD17B11Q8NBQ5 300 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 OR10R2Q8NGX6 335 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 ZNF649Q9BS31 505 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 STARD10Q9Y365 291 aa16.79■□□□□ 0.28
CCDC50-202ENST00000392456 A6NNC1 897 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 PROB1E7EW31 1015 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 NDUFB2O95178 105 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 F13BP05160 661 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 DHRS11Q6UWP2 260 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 VASH2Q86V25 355 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 IZUMO1Q8IYV9 350 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 OR2M3Q8NG83 312 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 NUDCD2Q8WVJ2 157 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 GNRHR2Q96P88 292 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 A0A0G2JMM0 328 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 A0A1W2PPB8 328 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 A0A1W2PRS3 328 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 KIR3DP1A8MWS1 328 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 C9JQL5 133 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 ZNF587BE7ETH6 402 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 IL18BPO95998 194 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 TMIGD3P0DMS9 266 aaPredicted RBP16.78■□□□□ 0.28
CCDC50-202ENST00000392456 DAOP14920 347 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 HIST1H1CP16403 213 aaKnown RBP16.78■□□□□ 0.28
CCDC50-202ENST00000392456 CRMP1Q14194 572 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 PNLIPRP3Q17RR3 467 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 GFI1BQ5VTD9 330 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 C11orf88Q6PI97 169 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 HEPN1Q6WQI6 88 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 OR4K13Q8NH42 304 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 GALNT14Q96FL9 552 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 C5orf34Q96MH7 638 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 CMC2Q9NRP2 79 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 KPTNQ9Y664 436 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 CEP295Q9C0D2 2601 aa16.78■□□□□ 0.28
CCDC50-202ENST00000392456 IGLV3-32A0A0A0MS00 114 aa16.77■□□□□ 0.28
CCDC50-202ENST00000392456 A0A0U1RQV5 110 aa16.77■□□□□ 0.28
CCDC50-202ENST00000392456 F5H0A9 414 aaPredicted RBP16.77■□□□□ 0.28
CCDC50-202ENST00000392456 PPP1R2P9O14990 202 aa16.77■□□□□ 0.28
CCDC50-202ENST00000392456 OGG1O15527 345 aa16.77■□□□□ 0.28
CCDC50-202ENST00000392456 RNF13O43567 381 aa16.77■□□□□ 0.28
CCDC50-202ENST00000392456 BGLAPP02818 100 aa16.77■□□□□ 0.28
CCDC50-202ENST00000392456 RPLP1P05386 114 aaKnown RBP16.77■□□□□ 0.28
CCDC50-202ENST00000392456 SLC25A4P12235 298 aa16.77■□□□□ 0.28
CCDC50-202ENST00000392456 SLC6A6P31641 620 aa16.77■□□□□ 0.28
CCDC50-202ENST00000392456 RPL4P36578 427 aaKnown RBP16.77■□□□□ 0.28
CCDC50-202ENST00000392456 ZNF84P51523 738 aa16.77■□□□□ 0.28
CCDC50-202ENST00000392456 PLPPR5Q32ZL2 321 aa16.77■□□□□ 0.28
CCDC50-202ENST00000392456 FAAP20Q6NZ36 180 aa16.77■□□□□ 0.28
CCDC50-202ENST00000392456 CXXC5Q7LFL8 322 aaKnown RBP16.77■□□□□ 0.28
CCDC50-202ENST00000392456 BEST3Q8N1M1 668 aa16.77■□□□□ 0.28
CCDC50-202ENST00000392456 OR52I2Q8NH67 350 aa16.77■□□□□ 0.28
CCDC50-202ENST00000392456 URB1O60287 2271 aaKnown RBP16.77■□□□□ 0.28
CCDC50-202ENST00000392456 CD8AP01732 235 aa16.77■□□□□ 0.27
CCDC50-202ENST00000392456 GYPBP06028 91 aa16.77■□□□□ 0.27
CCDC50-202ENST00000392456 HKR1P10072 659 aa16.77■□□□□ 0.27
CCDC50-202ENST00000392456 CDH11P55287 796 aa16.77■□□□□ 0.27
CCDC50-202ENST00000392456 ACOT7LQ6ZUV0 252 aa16.77■□□□□ 0.27
CCDC50-202ENST00000392456 ZPLD1Q8TCW7 415 aa16.77■□□□□ 0.27
CCDC50-202ENST00000392456 SPRYD4Q8WW59 207 aaPredicted RBP16.77■□□□□ 0.27
CCDC50-202ENST00000392456 LIPHQ8WWY8 451 aa16.77■□□□□ 0.27
CCDC50-202ENST00000392456 RASD2Q96D21 266 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms