RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 PNPLA2Q96AD5 504 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 PRRT1Q99946 306 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 FBXO4Q9UKT5 387 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 PLEKHA6Q9Y2H5 1048 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 LOC101059948A0A1B0GTJ6 334 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 PLSCR5A0PG75 271 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 MPTX1A8MV57 137 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 ARPC5O15511 151 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 TRAF3IP2O43734 574 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-204ENST00000392003 RP2O75695 350 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 PGA4P0DJD7 388 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 PGA3P0DJD8 388 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 FGF5P12034 268 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 ZNF28P17035 718 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 CLDN17P56750 224 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 UBE2MP61081 183 aaKnown RBP8.53□□□□□ -1.04
COL6A3-204ENST00000392003 MPPED2Q15777 294 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 DCAF12Q5T6F0 453 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 HAGHLQ6PII5 290 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-204ENST00000392003 SLC23A3Q6PIS1 610 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 TRAPPC6BQ86SZ2 158 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 OR52N4Q8NGI2 321 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 OR1J2Q8NGS2 313 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 ASB13Q8WXK3 278 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 SLAMF9Q96A28 289 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 GPER1Q99527 375 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 OPN4Q9UHM6 478 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 CACNA1HO95180 2353 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 A0A0C4DFX4 3053 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 NSG1A0A0A6YYJ2 146 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 MCRIP1C9JLW8 97 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 ITGB2P05107 769 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 OR4E1P0C645 316 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 CD37P11049 281 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 CDAP32320 146 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 ZNF93P35789 620 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-204ENST00000392003 CLDN6P56747 220 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 CXADRP78310 365 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 DHODHQ02127 395 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 OR8G1Q15617 311 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 NKPD1Q17RQ9 610 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 MRPL14Q6P1L8 145 aaKnown RBP8.53□□□□□ -1.04
COL6A3-204ENST00000392003 SLC25A47Q6Q0C1 308 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 PGAP1Q75T13 922 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 FJX1Q86VR8 437 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 ANGPTL5Q86XS5 388 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 WDFY1Q8IWB7 410 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 MAML2Q8IZL2 1156 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-204ENST00000392003 ADAT3Q96EY9 351 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-204ENST00000392003 FAM71F1Q96KD3 344 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-204ENST00000392003 NAA11Q9BSU3 229 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-204ENST00000392003 ARL6Q9H0F7 186 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 METTL9Q9H1A3 318 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 COMMD9Q9P000 198 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 EP300Q09472 2414 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-204ENST00000392003 S100A11P31949 105 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 CSNK1A1P48729 337 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 FABP9Q0Z7S8 132 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 RAET1LQ5VY80 246 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 ZNF813Q6ZN06 617 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 TMPPEQ6ZT21 453 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 GALNT16Q8N428 558 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 DNTTIP1Q9H147 329 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 DKKL1Q9UK85 242 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 PADI1Q9ULC6 663 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 NOP16Q9Y3C1 178 aaKnown RBP8.52□□□□□ -1.05
COL6A3-204ENST00000392003 LHFPL6Q9Y693 200 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 SDK2Q58EX2 2172 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 AQP7P3A6NL99 342 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 HMSDA8MTL9 139 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 NPIPA2E9PIF3 369 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 NPIPA3F8WFD2 350 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 G3V3Q6 166 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 RPS2P15880 293 aaKnown RBP8.52□□□□□ -1.05
COL6A3-204ENST00000392003 ZNF25P17030 456 aaPredicted RBP8.52□□□□□ -1.05
COL6A3-204ENST00000392003 ZNF121P58317 390 aaPredicted RBP8.52□□□□□ -1.05
COL6A3-204ENST00000392003 NUTF2P61970 127 aaKnown RBP8.52□□□□□ -1.05
COL6A3-204ENST00000392003 GRB2P62993 217 aaKnown RBP8.52□□□□□ -1.05
COL6A3-204ENST00000392003 PCOLCEQ15113 449 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 MOGAT2Q3SYC2 334 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 REC114Q7Z4M0 266 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 CD163Q86VB7 1156 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 RXFP4Q8TDU9 374 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 PGAM5Q96HS1 289 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 GGACTQ9BVM4 153 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 CHST6Q9GZX3 395 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 ADAMTS20P59510 1910 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 TUBAL3A6NHL2 446 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 CBR3O75828 277 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 MELTFP08582 738 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 NMBP08949 121 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 SLC2A1P11166 492 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 TDGF1P13385 188 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 CXCL2P19875 107 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 CD34P28906 385 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 CX3CR1P49238 355 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 SSR4P51571 173 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 CLN3Q13286 438 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 ALKAL2Q6UX46 152 aa8.52□□□□□ -1.05
COL6A3-204ENST00000392003 FAM57BQ71RH2 274 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms