RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 CHATP28329 748 aa12.96□□□□□ -0.33
PSME4-201ENST00000389993 LIMK1P53667 647 aa12.96□□□□□ -0.33
PSME4-201ENST00000389993 CLDN20P56880 219 aa12.96□□□□□ -0.33
PSME4-201ENST00000389993 SNTB1Q13884 538 aaKnown RBP12.96□□□□□ -0.33
PSME4-201ENST00000389993 FOXJ3Q9UPW0 622 aa12.96□□□□□ -0.33
PSME4-201ENST00000389993 AADACP22760 399 aa12.96□□□□□ -0.33
PSME4-201ENST00000389993 S100A11P31949 105 aa12.96□□□□□ -0.33
PSME4-201ENST00000389993 LGALS4P56470 323 aa12.96□□□□□ -0.33
PSME4-201ENST00000389993 RPL19P84098 196 aaKnown RBP12.96□□□□□ -0.33
PSME4-201ENST00000389993 OR8B12Q8NGG6 310 aa12.96□□□□□ -0.33
PSME4-201ENST00000389993 C22orf15Q8WYQ4 148 aa12.96□□□□□ -0.33
PSME4-201ENST00000389993 FAM117AQ9C073 453 aa12.96□□□□□ -0.33
PSME4-201ENST00000389993 TMEM100Q9NV29 134 aa12.96□□□□□ -0.33
PSME4-201ENST00000389993 OR5V1Q9UGF6 321 aa12.96□□□□□ -0.33
PSME4-201ENST00000389993 PRELID1Q9Y255 219 aa12.96□□□□□ -0.33
PSME4-201ENST00000389993 MTCL1Q9Y4B5 1905 aaKnown RBP12.96□□□□□ -0.33
PSME4-201ENST00000389993 LRP3O75074 770 aa12.96□□□□□ -0.34
PSME4-201ENST00000389993 ONECUT2O95948 504 aa12.96□□□□□ -0.34
PSME4-201ENST00000389993 RAF1P04049 648 aa12.96□□□□□ -0.34
PSME4-201ENST00000389993 OR5H8P0DN80 308 aa12.96□□□□□ -0.34
PSME4-201ENST00000389993 CNR1P21554 472 aa12.96□□□□□ -0.34
PSME4-201ENST00000389993 RPL11P62913 178 aaKnown RBP12.96□□□□□ -0.34
PSME4-201ENST00000389993 KHDC1LQ5JSQ8 128 aa12.96□□□□□ -0.34
PSME4-201ENST00000389993 PMS2CLQ68D20 193 aa12.96□□□□□ -0.34
PSME4-201ENST00000389993 GDF15Q99988 308 aa12.96□□□□□ -0.34
PSME4-201ENST00000389993 RBMXL3Q8N7X1 1067 aaKnown RBP12.96□□□□□ -0.34
PSME4-201ENST00000389993 SCO1O75880 301 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 KITLGP21583 273 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 PRAMEF5Q5TYX0 476 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 PRAMEF6Q5VXH4 476 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 C17orf50Q8WW18 174 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 CCL17Q92583 94 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 ZNF501Q96CX3 271 aaPredicted RBP12.95□□□□□ -0.34
PSME4-201ENST00000389993 NKX2-8O15522 239 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 TBX19O60806 448 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 CRYZL1O95825 349 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 TMIGD3P0DMS9 266 aaPredicted RBP12.95□□□□□ -0.34
PSME4-201ENST00000389993 RPP30P78346 268 aaKnown RBP12.95□□□□□ -0.34
PSME4-201ENST00000389993 PRR7Q8TB68 274 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 PCED1AQ9H1Q7 454 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 AKIRIN1Q9H9L7 192 aaPredicted RBP12.95□□□□□ -0.34
PSME4-201ENST00000389993 TRPM7Q96QT4 1865 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 SSX2Q16385 188 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 ZNF385AQ96PM9 386 aaKnown RBP12.95□□□□□ -0.34
PSME4-201ENST00000389993 EXOGQ9Y2C4 368 aaKnown RBP12.95□□□□□ -0.34
PSME4-201ENST00000389993 OPN1MWP04001 364 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 OPN1MW2P0DN77 364 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 OPN1MW3P0DN78 364 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 GPR12P47775 334 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 TAF9BQ9HBM6 251 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 LTBRP36941 435 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 CLEC12BQ2HXU8 276 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 ZNF573Q86YE8 665 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 MFSD4AQ8N468 514 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 LILRB4Q8NHJ6 448 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 TMED6Q8WW62 240 aa12.95□□□□□ -0.34
PSME4-201ENST00000389993 CHRM2P08172 466 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 OR8U8P0C7N1 319 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 HMGA2P52926 109 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 TRA2AQ13595 282 aaKnown RBP eCLIP12.94□□□□□ -0.34
PSME4-201ENST00000389993 ZNF718Q3SXZ3 478 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 MRGPREQ86SM8 312 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 EXOSC3Q9NQT5 275 aaKnown RBP12.94□□□□□ -0.34
PSME4-201ENST00000389993 HMGB3O15347 200 aaKnown RBP12.94□□□□□ -0.34
PSME4-201ENST00000389993 GCM2O75603 506 aaPredicted RBP12.94□□□□□ -0.34
PSME4-201ENST00000389993 NHLRC1Q6VVB1 395 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 SFT2D1Q8WV19 159 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 OR5H14A6NHG9 310 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 FKBP2P26885 142 aaKnown RBP12.94□□□□□ -0.34
PSME4-201ENST00000389993 HAGHQ16775 308 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 ZFP82Q8N141 532 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 SLC35G3Q8N808 338 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 ST7LQ8TDW4 575 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 C4orf45Q96LM5 186 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 RNF212BA8MTL3 300 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 ZNF354AO60765 605 aaPredicted RBP12.94□□□□□ -0.34
PSME4-201ENST00000389993 ACAA2P42765 397 aaKnown RBP12.94□□□□□ -0.34
PSME4-201ENST00000389993 GAB4Q2WGN9 574 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 WDR89Q96FK6 387 aaPredicted RBP12.94□□□□□ -0.34
PSME4-201ENST00000389993 IP6K3Q96PC2 410 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 MOB1AQ9H8S9 216 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 SHISA5Q8N114 240 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 HIPK2Q9H2X6 1198 aa12.94□□□□□ -0.34
PSME4-201ENST00000389993 SUMO3P55854 103 aaPredicted RBP12.93□□□□□ -0.34
PSME4-201ENST00000389993 PRDX4Q13162 271 aa12.93□□□□□ -0.34
PSME4-201ENST00000389993 PXT1Q8NFP0 134 aa12.93□□□□□ -0.34
PSME4-201ENST00000389993 PHYHIPQ92561 330 aa12.93□□□□□ -0.34
PSME4-201ENST00000389993 GPR137BO60478 399 aa12.93□□□□□ -0.34
PSME4-201ENST00000389993 TSPO2Q5TGU0 170 aa12.93□□□□□ -0.34
PSME4-201ENST00000389993 BTNL3Q6UXE8 466 aa12.93□□□□□ -0.34
PSME4-201ENST00000389993 CDH26Q8IXH8 852 aa12.93□□□□□ -0.34
PSME4-201ENST00000389993 KCNRGQ8N5I3 272 aa12.93□□□□□ -0.34
PSME4-201ENST00000389993 PCOLCE2Q9UKZ9 415 aa12.93□□□□□ -0.34
PSME4-201ENST00000389993 A0A0D9SG52 128 aa12.93□□□□□ -0.34
PSME4-201ENST00000389993 PLPP2O43688 288 aa12.93□□□□□ -0.34
PSME4-201ENST00000389993 NKX2-1P43699 371 aaPredicted RBP12.93□□□□□ -0.34
PSME4-201ENST00000389993 IL34Q6ZMJ4 242 aa12.93□□□□□ -0.34
PSME4-201ENST00000389993 RFPL4BQ6ZWI9 263 aa12.93□□□□□ -0.34
PSME4-201ENST00000389993 NLRC3Q7RTR2 1065 aa12.93□□□□□ -0.34
PSME4-201ENST00000389993 OR1S2Q8NGQ3 325 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms