RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 SH2D4AQ9H788 454 aa-1.76□□□□□ -2.69
RNU6-540P-201ENST00000384622 LMAN1LQ9HAT1 526 aa-1.76□□□□□ -2.69
RNU6-540P-201ENST00000384622 SLCO1B3Q9NPD5 702 aa-1.76□□□□□ -2.69
RNU6-540P-201ENST00000384622 TUBG2Q9NRH3 451 aa-1.76□□□□□ -2.69
RNU6-540P-201ENST00000384622 SLC2A9Q9NRM0 540 aa-1.76□□□□□ -2.69
RNU6-540P-201ENST00000384622 FARSBQ9NSD9 589 aaKnown RBP-1.76□□□□□ -2.69
RNU6-540P-201ENST00000384622 SLC35D1Q9NTN3 355 aa-1.76□□□□□ -2.69
RNU6-540P-201ENST00000384622 APLNQ9ULZ1 77 aa-1.76□□□□□ -2.69
RNU6-540P-201ENST00000384622 TMA7Q9Y2S6 64 aaKnown RBP-1.76□□□□□ -2.69
RNU6-540P-201ENST00000384622 USP47Q96K76 1375 aa-1.76□□□□□ -2.69
RNU6-540P-201ENST00000384622 SBNO2Q9Y2G9 1366 aa-1.76□□□□□ -2.69
RNU6-540P-201ENST00000384622 GOLGA3Q08378 1498 aa-1.76□□□□□ -2.69
RNU6-540P-201ENST00000384622 HMGXB3Q12766 1538 aa-1.76□□□□□ -2.69
RNU6-540P-201ENST00000384622 AK9Q5TCS8 1911 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 IGLV5-48A0A075B6I7 105 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 IGHV3-49A0A0A0MS15 119 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 IGHV3-73A0A0B4J1V6 119 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 SMIM28A0A1B0GU29 152 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 A0A1W2PPV9 198 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 TTC26A0AVF1 554 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 E5RGE8 158 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 BCKDKO14874 412 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 ARPC1BO15143 372 aaKnown RBP-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 KMOO15229 486 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 HCRTR1O43613 425 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 SELENOFO60613 162 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 CSO75390 466 aaKnown RBP-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 ATP6AP2O75787 350 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 SLC4A1P02730 911 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 SHBGP04278 402 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 IFNW1P05000 195 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 KRT7P08729 469 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 IFIT1P09914 478 aaKnown RBP-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 COX6A1P12074 109 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 AKR1B1P15121 316 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 ZNF24P17028 368 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 SDC1P18827 310 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 AGTR1P30556 359 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 BSGP35613 385 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 CHI3L1P36222 383 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 CRATP43155 626 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 ACOT2P49753 483 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 TMEM267Q0VDI3 215 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 DYNC1I2Q13409 638 aaKnown RBP-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 GPM6BQ13491 265 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 PRPSAP1Q14558 356 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 CCDC158Q5M9N0 1113 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 TPRG1LQ5T0D9 272 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 DCAF12Q5T6F0 453 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 HHATQ5VTY9 493 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 PLPP4Q5VZY2 271 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 MZT2BQ6NZ67 158 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 TMEM220Q6QAJ8 160 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 SYT10Q6XYQ8 523 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 CCDC73Q6ZRK6 1079 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 SPATA21Q7Z572 469 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 FAM223AQ8IWN6 122 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 HOMEZQ8IX15 550 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 C20orf197Q8N268 126 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 CD200R1Q8TD46 325 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 C15orf40Q8WUR7 153 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 CKAP2Q8WWK9 683 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 C8orf44Q96CB5 159 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 GPR146Q96CH1 333 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 NPY6RQ99463 290 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 CCM2Q9BSQ5 444 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 SLC19A3Q9BZV2 496 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 SPATC1LQ9H0A9 340 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 TLNRD1Q9H1K6 362 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 ABCG8Q9H221 673 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 RHBGQ9H310 441 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 RNPEPL1Q9HAU8 725 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 UGT1A10Q9HAW8 530 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 UGT1A8Q9HAW9 530 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 MAGEF1Q9HAY2 307 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 CDH20Q9HBT6 801 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 S100A14Q9HCY8 104 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 CD209Q9NNX6 404 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 CTPS2Q9NRF8 586 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 ANKEF1Q9NU02 776 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 C14orf105Q9NVL8 296 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 IRAK4Q9NWZ3 460 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 PAQR5Q9NXK6 330 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 SAGE1Q9NXZ1 904 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 OR1A1Q9P1Q5 309 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 NAGKQ9UJ70 344 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 KIAA1257Q9ULG3 409 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 HHLA3Q9XRX5 114 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 NSG2Q9Y328 171 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 IKBKGQ9Y6K9 419 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 KANK1Q14678 1352 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 DHX29Q7Z478 1369 aaKnown RBP-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 TDRD9Q8NDG6 1382 aaKnown RBP-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 NUP153P49790 1475 aaKnown RBP-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 CLASP1Q7Z460 1538 aa-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 NUP210Q8TEM1 1887 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-540P-201ENST00000384622 A0A1B0GVX0 72 aa-1.78□□□□□ -2.69
RNU6-540P-201ENST00000384622 TMEM120BA0PK00 339 aa-1.78□□□□□ -2.69
RNU6-540P-201ENST00000384622 FAM159BA6NKW6 160 aa-1.78□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms