RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 GINS3Q9BRX5 216 aa13.27□□□□□ -0.29
CTNS-202ENST00000381870 BANF2Q9H503 90 aa13.27□□□□□ -0.29
CTNS-202ENST00000381870 PHPT1Q9NRX4 125 aaPredicted RBP13.27□□□□□ -0.29
CTNS-202ENST00000381870 ANAPC10Q9UM13 185 aa13.27□□□□□ -0.29
CTNS-202ENST00000381870 RFNGQ9Y644 331 aa13.27□□□□□ -0.29
CTNS-202ENST00000381870 VCANP13611 3396 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 TMEM269A0A1B0GVZ9 245 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 A0A1W2PP11 408 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 TMEM14DPA8MWL7 114 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 TGFBR3LH3BV60 316 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 EREGO14944 169 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 MPIG6BO95866 241 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 CSF2RAP15509 400 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 AMY2BP19961 511 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 DRD3P35462 400 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 DLK1P80370 383 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 ACKR1Q16570 336 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 AKR1C8PQ5T2L2 129 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 PLPP4Q5VZY2 271 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 GGNBP1Q5YKI7 109 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 TCEAL6Q6IPX3 200 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 FIGLAQ6QHK4 219 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 PLXDC2Q6UX71 529 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 C5orf24Q7Z6I8 188 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 LRRC18Q8N456 261 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 OR10G6Q8NH81 332 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 FNDC9Q8TBE3 224 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 HPSE2Q8WWQ2 592 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 MRPL24Q96A35 216 aaKnown RBP13.26□□□□□ -0.29
CTNS-202ENST00000381870 SCGB3A2Q96PL1 93 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 HDAC8Q9BY41 377 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 FOXQ1Q9C009 403 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 UNKLQ9H9P5 680 aaKnown RBP13.26□□□□□ -0.29
CTNS-202ENST00000381870 TBC1D29Q9UFV1 150 aa13.26□□□□□ -0.29
CTNS-202ENST00000381870 FIGNL2A6NMB9 653 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 GPR89AB7ZAQ6 455 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 HSD17B6O14756 317 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 ISG15P05161 165 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 HCKP08631 526 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 GPR89BP0CG08 455 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 HSD11B1P28845 292 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 HOXA6P31267 233 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 TMEM50BP56557 158 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 HIKESHIQ53FT3 197 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 ZNF664Q8N3J9 261 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 OR5R1Q8NH85 324 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 SLC25A31Q9H0C2 315 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 C1orf123Q9NWV4 160 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 NOTCH4Q99466 2003 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 BORCS7-ASMTA0A0B4J1R7 106 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 SMCO3A2RU48 225 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 ADAM10O14672 748 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 SYT7O43581 403 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 WISP1O95388 367 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 GUSBP08236 651 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 HIST1H1DP16402 221 aaKnown RBP13.25□□□□□ -0.29
CTNS-202ENST00000381870 BCKDHBP21953 392 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 RBMXP38159 391 aaKnown RBP13.25□□□□□ -0.29
CTNS-202ENST00000381870 CEACAM6P40199 344 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 OR3A2P47893 321 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 P2RY1P47900 373 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 DHPSP49366 369 aaPredicted RBP13.25□□□□□ -0.29
CTNS-202ENST00000381870 C1orf140Q5VVS0 124 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 M1APQ8TC57 530 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 ARHGAP5-AS1Q96IT6 56 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 EHFQ9NZC4 300 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 SERGEFQ9UGK8 458 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 TUBD1Q9UJT1 453 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 B3GALT5Q9Y2C3 310 aa13.25□□□□□ -0.29
CTNS-202ENST00000381870 COA3Q9Y2R0 106 aaPredicted RBP13.25□□□□□ -0.29
CTNS-202ENST00000381870 OTOL1A6NHN0 477 aaPredicted RBP13.24□□□□□ -0.29
CTNS-202ENST00000381870 C9J4A7 227 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 XRCC2O43543 280 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 BGLAPP02818 100 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 CXCR1P25024 350 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 CTNNB1P35222 781 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 SUCLG1P53597 346 aaKnown RBP13.24□□□□□ -0.29
CTNS-202ENST00000381870 DCXRQ7Z4W1 244 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 FAM3CQ92520 227 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 ABHD14AQ9BUJ0 271 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.24□□□□□ -0.29
CTNS-202ENST00000381870 STRAPQ9Y3F4 350 aaKnown RBP13.24□□□□□ -0.29
CTNS-202ENST00000381870 UNC80Q8N2C7 3258 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 TLCD2A6NGC4 264 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 C17orf51A8MQB3 221 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 A8MVM7 634 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 CYTIPO60759 359 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 SCGNO76038 276 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 NSA2O95478 260 aaKnown RBP13.24□□□□□ -0.29
CTNS-202ENST00000381870 NR2C1P13056 603 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 ASCL1P50553 236 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 NHLH2Q02577 135 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 GLIPR1L1Q6UWM5 242 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 RERGQ96A58 199 aaPredicted RBP13.24□□□□□ -0.29
CTNS-202ENST00000381870 NDUFAF3Q9BU61 184 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 PLEKHA2Q9HB19 425 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 PPP1R14DQ9NXH3 145 aa13.24□□□□□ -0.29
CTNS-202ENST00000381870 A0A087WWC5 75 aa13.23□□□□□ -0.29
CTNS-202ENST00000381870 RBFOX3A6NFN3 312 aa13.23□□□□□ -0.29
CTNS-202ENST00000381870 MBPP02686 304 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms