RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 CCDC159P0C7I6 412 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 HIST1H1CP16403 213 aaKnown RBP13.92□□□□□ -0.18
HMGN1-203ENST00000380748 GABRA2P47869 451 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 NKAPLQ5M9Q1 402 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 CASC10Q5T4H9 136 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 C11orf42Q8N5U0 333 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 LINC00482Q8N8I6 264 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 TMEM185AQ8NFB2 350 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 OR5K1Q8NHB7 308 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 MYDGFQ969H8 173 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 TLCD1Q96CP7 247 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 KRTAP17-1Q9BYP8 105 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 ABCB10Q9NRK6 738 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 NLKQ9UBE8 527 aa13.92□□□□□ -0.18
HMGN1-203ENST00000380748 IGKV1D-17A0A075B6S4 117 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 OR6C68A6NDL8 312 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 UNC119BA6NIH7 251 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 OR2AT4A6NND4 320 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 TBX1O43435 398 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 XRCC2O43543 280 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 CLIC3O95833 236 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 ALDOBP05062 364 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 GNALP38405 381 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 KLHL22Q53GT1 634 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 AGBL2Q5U5Z8 902 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 SMARCD3Q6STE5 483 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 ZDHHC21Q8IVQ6 265 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 CYB561A3Q8NBI2 242 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 SDR9C7Q8NEX9 313 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 OR10Z1Q8NGY1 313 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 PAPOLGQ9BWT3 736 aaKnown RBP13.91□□□□□ -0.18
HMGN1-203ENST00000380748 KCNG2Q9UJ96 466 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 PITPNC1Q9UKF7 332 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 RHBDD3Q9Y3P4 386 aa13.91□□□□□ -0.18
HMGN1-203ENST00000380748 HUWE1Q7Z6Z7 4374 aaKnown RBP13.91□□□□□ -0.18
HMGN1-203ENST00000380748 hCG_38984A0A1B0GV85 526 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 TVP23AA6NH52 213 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 ZNF682O95780 498 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 ZNF823P16415 610 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 JUNBP17275 347 aaPredicted RBP13.9□□□□□ -0.18
HMGN1-203ENST00000380748 LMO1P25800 156 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 NOS3P29474 1203 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 SLC7A2P52569 658 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 SPIBQ01892 262 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 IFI44LQ53G44 452 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 DMRTC1Q5HYR2 192 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 KHDC1LQ5JSQ8 128 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 LDLRAD2Q5SZI1 272 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 LYPD4Q6UWN0 246 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 ZNF782Q6ZMW2 699 aaPredicted RBP13.9□□□□□ -0.18
HMGN1-203ENST00000380748 DCXRQ7Z4W1 244 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 OR2T12Q8NG77 320 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 FANK1Q8TC84 345 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 REEP6Q96HR9 211 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 MICU1Q9BPX6 476 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 PARD6BQ9BYG5 372 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 GPR61Q9BZJ8 451 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 FGF23Q9GZV9 251 aaPredicted RBP13.9□□□□□ -0.18
HMGN1-203ENST00000380748 ANKRD19PQ9H560 264 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 GMPR2Q9P2T1 348 aaKnown RBP13.9□□□□□ -0.18
HMGN1-203ENST00000380748 ZNF222Q9UK12 451 aa13.9□□□□□ -0.18
HMGN1-203ENST00000380748 F2RL2O00254 374 aa13.89□□□□□ -0.19
HMGN1-203ENST00000380748 RHBDL1O75783 438 aa13.89□□□□□ -0.19
HMGN1-203ENST00000380748 CCL3L1P16619 93 aa13.89□□□□□ -0.19
HMGN1-203ENST00000380748 PYCR1P32322 319 aa13.89□□□□□ -0.19
HMGN1-203ENST00000380748 SEC23BQ15437 767 aa13.89□□□□□ -0.19
HMGN1-203ENST00000380748 SSX2Q16385 188 aa13.89□□□□□ -0.19
HMGN1-203ENST00000380748 KLHL12Q53G59 568 aa13.89□□□□□ -0.19
HMGN1-203ENST00000380748 FGD3Q5JSP0 725 aa13.89□□□□□ -0.19
HMGN1-203ENST00000380748 C10orf99Q6UWK7 81 aa13.89□□□□□ -0.19
HMGN1-203ENST00000380748 CENPVQ7Z7K6 275 aaPredicted RBP13.89□□□□□ -0.19
HMGN1-203ENST00000380748 MRPL41Q8IXM3 137 aaKnown RBP13.89□□□□□ -0.19
HMGN1-203ENST00000380748 MUC7Q8TAX7 377 aa13.89□□□□□ -0.19
HMGN1-203ENST00000380748 SGK3Q96BR1 496 aa13.89□□□□□ -0.19
HMGN1-203ENST00000380748 KCNJ15Q99712 375 aa13.89□□□□□ -0.19
HMGN1-203ENST00000380748 CENPMQ9NSP4 180 aa13.89□□□□□ -0.19
HMGN1-203ENST00000380748 ARPC3O15145 178 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 PSG2P11465 335 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 GSK3AP49840 483 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 CAPZA1P52907 286 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 SLC25A1P53007 311 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 IL5RAQ01344 420 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 DOC2BQ14184 412 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 TAF13Q15543 124 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 TIGD6Q17RP2 521 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 TMEM200BQ69YZ2 307 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 ETV3LQ6ZN32 361 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 CPLX4Q7Z7G2 160 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 OR4C15Q8NGM1 316 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 ZNRF4Q8WWF5 429 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 FOXRED1Q96CU9 486 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-203ENST00000380748 SLAMF6Q96DU3 332 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 HSH2DQ96JZ2 352 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 ASCL2Q99929 193 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 RTL8AQ9BWD3 113 aa13.88□□□□□ -0.19
HMGN1-203ENST00000380748 TRBV4-1A0A0J9YWV2 114 aa13.87□□□□□ -0.19
HMGN1-203ENST00000380748 A0A1W2PRQ8 180 aa13.87□□□□□ -0.19
HMGN1-203ENST00000380748 ANXA2P2A6NMY6 339 aa13.87□□□□□ -0.19
HMGN1-203ENST00000380748 MRASO14807 208 aa13.87□□□□□ -0.19
HMGN1-203ENST00000380748 ARG1P05089 322 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms