RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 STAC2Q6ZMT1 411 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 ZNF574Q6ZN55 896 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 OR1L4Q8NGR5 311 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 OR5R1Q8NH85 324 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 CXorf58Q96LI9 332 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 GALNT9Q9HCQ5 603 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 MYH4Q9Y623 1939 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 RNASEK-C17orf49H0YIS7 233 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 CHEK1O14757 476 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 CLINT1Q14677 625 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 ACOT7LQ6ZUV0 252 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 FAM122BQ7Z309 247 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 CDH26Q8IXH8 852 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 ZDHHC22Q8N966 263 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 SCARB1Q8WTV0 552 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 RTN4IP1Q8WWV3 396 aaPredicted RBP6.41□□□□□ -1.38
CCDC171-201ENST00000380701 PDCD1LG2Q9BQ51 273 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 DNAJB12Q9NXW2 375 aaKnown RBP6.41□□□□□ -1.38
CCDC171-201ENST00000380701 RNF7Q9UBF6 113 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 TNRC6CQ9HCJ0 1690 aaKnown RBP6.41□□□□□ -1.38
CCDC171-201ENST00000380701 EPPINO95925 133 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 KRASP01116 189 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 PAX6P26367 422 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 LGALS7P47929 136 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 SOX8P57073 446 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 SPCS2Q15005 226 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 SSX2Q16385 188 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 TMEM268Q5VZI3 342 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 SHISA5Q8N114 240 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 ADPRHL1Q8NDY3 354 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 CLDN23Q96B33 292 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.41□□□□□ -1.38
CCDC171-201ENST00000380701 PURGQ9UJV8 347 aaKnown RBP6.41□□□□□ -1.38
CCDC171-201ENST00000380701 A0A0B4J2A0 478 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 M0QYG6 137 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 AGPAT2O15120 278 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 PRR35P0CG20 571 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 MGST1P10620 155 aaKnown RBP6.41□□□□□ -1.38
CCDC171-201ENST00000380701 FZD5Q13467 585 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 SURF2Q15527 256 aaPredicted RBP6.41□□□□□ -1.38
CCDC171-201ENST00000380701 PABPC1L2AQ5JQF8 200 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 LYSMD2Q8IV50 215 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 OR4S2Q8NH73 311 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 OR5M11Q96RB7 305 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 MED9Q9NWA0 146 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 SHPKQ9UHJ6 478 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 LOXHD1Q8IVV2 1947 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 FABP7O15540 132 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 XRCC3O43542 346 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 PDCD6O75340 191 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 SNRNP70P08621 437 aaKnown RBP6.41□□□□□ -1.38
CCDC171-201ENST00000380701 PSMB6P28072 239 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 CALCRP30988 508 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 COL19A1Q14993 1142 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 Q6ZPB1 254 aaPredicted RBP6.41□□□□□ -1.38
CCDC171-201ENST00000380701 MAVSQ7Z434 540 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.41□□□□□ -1.38
CCDC171-201ENST00000380701 CALHM3Q86XJ0 350 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 HSD17B11Q8NBQ5 300 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 LRRC29Q8WV35 223 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 MAP6Q96JE9 813 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 C20orf27Q9GZN8 174 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 NTMQ9P121 344 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 SLC45A2Q9UMX9 530 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 ZNF785A8K8V0 405 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 NAT2P11245 290 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 EDN3P14138 238 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 CLEC2AQ6UVW9 174 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 ZNF683Q8IZ20 524 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 ZNF439Q8NDP4 499 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 RASL10BQ96S79 203 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 TAF9BQ9HBM6 251 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 SLC25A37Q9NYZ2 338 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 PSENENQ9NZ42 101 aa6.41□□□□□ -1.38
CCDC171-201ENST00000380701 DOCK2Q92608 1830 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 SIAH2O43255 324 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 FPR2P25090 351 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 PRDX4Q13162 271 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 C12orf73Q69YU5 71 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 STUMQ69YW2 141 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 LAX1Q8IWV1 398 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 OR1L1Q8NH94 360 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 AKR7LQ8NHP1 331 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 GPR119Q8TDV5 335 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 FYTTD1Q96QD9 318 aaKnown RBP6.4□□□□□ -1.38
CCDC171-201ENST00000380701 PPP1R3CQ9UQK1 317 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 SIGLEC7Q9Y286 467 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 C7orf72A4D263 438 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 H7BYZ3 331 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 M0R1X1 148 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 GFRA3O60609 400 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 SP1P08047 785 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 MLF1P58340 268 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 PAFAH1B2P68402 229 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 C2orf76Q3KRA6 126 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 PHYHD1Q5SRE7 291 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 RBM45Q8IUH3 476 aaKnown RBP6.4□□□□□ -1.38
CCDC171-201ENST00000380701 SFTPA2Q8IWL1 248 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 SFTPA1Q8IWL2 248 aa6.4□□□□□ -1.38
CCDC171-201ENST00000380701 ITGB4P16144 1822 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms