RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 FUT7Q11130 342 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 CTRB2Q6GPI1 263 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 TEX261Q6UWH6 196 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 OR52N4Q8NGI2 321 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 KISS1RQ969F8 398 aaPredicted RBP14.39□□□□□ -0.11
COL2A1-202ENST00000380518 U3KQ87 197 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 FPR2P25090 351 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 DEFB109BQ30KR1 87 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 PDZD11Q5EBL8 140 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 OR1J1Q8NGS3 322 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 ERGIC1Q969X5 290 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 TAAR9Q96RI9 348 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 NDRG3Q9UGV2 375 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 EXOGQ9Y2C4 368 aaKnown RBP14.39□□□□□ -0.11
COL2A1-202ENST00000380518 CCDC187A0A096LP49 1063 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 CHEK1O14757 476 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 EPPINO95925 133 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 IGHA2P01877 340 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 GP1BAP07359 652 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 PRICKLE4Q2TBC4 344 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 DEFB123Q8N688 67 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 ADPRHL1Q8NDY3 354 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 EID2BQ96D98 161 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 ZG16BQ96DA0 208 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 FAM173AQ9BQD7 235 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 KNTC1P50748 2209 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 SCAND1P57086 179 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 RGS7BPQ6MZT1 257 aaPredicted RBP14.39□□□□□ -0.11
COL2A1-202ENST00000380518 ARRDC1-AS1Q9H2J1 176 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 SLC35D1Q9NTN3 355 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 MTFP1Q9UDX5 166 aa14.39□□□□□ -0.11
COL2A1-202ENST00000380518 RCL1Q9Y2P8 373 aaKnown RBP14.39□□□□□ -0.11
COL2A1-202ENST00000380518 KIF13AQ9H1H9 1805 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 ALG1L2C9J202 215 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 GNG3P63215 75 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 TMEM104Q8NE00 496 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 SCN9AQ15858 1988 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 TRA2AQ13595 282 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL2A1-202ENST00000380518 SSX1Q16384 188 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 WIPI1Q5MNZ9 446 aaPredicted RBP14.38□□□□□ -0.11
COL2A1-202ENST00000380518 Q8IYB0 196 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 NECAP1Q8NC96 275 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 OR10G3Q8NGC4 313 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 MYH14Q7Z406 1995 aaKnown RBP14.38□□□□□ -0.11
COL2A1-202ENST00000380518 GPR37O15354 613 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 C1QAP02745 245 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 SLC25A6P12236 298 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 ZBTB25P24278 435 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 PCBP3P57721 371 aaKnown RBP14.38□□□□□ -0.11
COL2A1-202ENST00000380518 OR2A2Q6IF42 318 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 ZBTB44Q8NCP5 570 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 NEURL2Q9BR09 285 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 SHISA8B8ZZ34 492 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 HOXC4P09017 264 aaPredicted RBP14.38□□□□□ -0.11
COL2A1-202ENST00000380518 GPM6AP51674 278 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 FMODQ06828 376 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 AANATQ16613 207 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 TMEM215Q68D42 235 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 NCR3LG1Q68D85 454 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 MFRPQ9BY79 579 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 CTDSP1Q9GZU7 261 aa14.38□□□□□ -0.11
COL2A1-202ENST00000380518 PMP22Q01453 160 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 KISS1Q15726 138 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 BTLAQ7Z6A9 289 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 GPBAR1Q8TDU6 330 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 PRRX2Q99811 253 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 ZNF251Q9BRH9 671 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 ADGRL4Q9HBW9 690 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 TMEM30CPA0ZSE6 113 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 SLC25A4P12235 298 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 HYAL1Q12794 435 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 IL11RAQ14626 422 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 CLLU1Q5K131 121 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 TRILQ7L0X0 811 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 FBXO4Q9UKT5 387 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 H3BP45 60 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 S100A8P05109 93 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 SULT1A3P0DMM9 295 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 SULT1A4P0DMN0 295 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 GSG1Q2KHT4 349 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 OR1L3Q8NH93 324 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 NDFIP1Q9BT67 221 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 IGHV5-51A0A0C4DH38 117 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 G3V3Q6 166 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 HIST1H1DP16402 221 aaKnown RBP14.37□□□□□ -0.11
COL2A1-202ENST00000380518 F2RP25116 425 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 PRSS41Q7RTY9 318 aa14.37□□□□□ -0.11
COL2A1-202ENST00000380518 AQP7P3A6NL99 342 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 C21orf58P58505 322 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 SPATA46Q5T0L3 261 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 VN1R4Q7Z5H5 301 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 ZNF561Q8N587 486 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 COMMD1Q8N668 190 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 CMBLQ96DG6 245 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 RHOFQ9HBH0 211 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 ZNF586Q9NXT0 402 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 TRGV10A0A0A0MS01 117 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 TRGV5A0A0B4J1U4 118 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 CST7O76096 145 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 WNT1P04628 370 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms