RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ADH1BP00325 375 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 CSTBP04080 98 aaKnown RBP8.34□□□□□ -1.07
PTPRA-204ENST00000380393 CTSDP07339 412 aaPredicted RBP8.34□□□□□ -1.07
PTPRA-204ENST00000380393 FOLR1P15328 257 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 GNRHRP30968 328 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 PPP1CCP36873 323 aaKnown RBP8.34□□□□□ -1.07
PTPRA-204ENST00000380393 CEACAM3P40198 252 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 DUSP3P51452 185 aaPredicted RBP8.34□□□□□ -1.07
PTPRA-204ENST00000380393 RHOAP61586 193 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 LTBQ06643 244 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 SPOCK1Q08629 439 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 LRRC73Q5JTD7 316 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 DNM1P46Q6ZS02 220 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 TMEM144Q7Z5S9 345 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 ZNF709Q8N972 641 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 GRHL3Q8TE85 626 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 LPAR4Q99677 370 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 NMES1Q9C002 83 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 SLCO5A1Q9H2Y9 848 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 TRBV24-1A0A075B6N3 115 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 CLEC18AA5D8T8 446 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 C4orf47A7E2U8 309 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 JTBO76095 146 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 CALCBP10092 127 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 TLE3Q04726 772 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 TP53I3Q53FA7 332 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 RNF219Q5W0B1 726 aaPredicted RBP8.34□□□□□ -1.07
PTPRA-204ENST00000380393 CLEC18CQ8NCF0 446 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 EID2BQ96D98 161 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 SRD5A3Q9H8P0 318 aa8.34□□□□□ -1.07
PTPRA-204ENST00000380393 SAP30O75446 220 aa8.34□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF10P21506 573 aaPredicted RBP8.34□□□□□ -1.08
PTPRA-204ENST00000380393 HOXD9P28356 352 aaPredicted RBP8.34□□□□□ -1.08
PTPRA-204ENST00000380393 CX3CR1P49238 355 aa8.34□□□□□ -1.08
PTPRA-204ENST00000380393 CST9LP1Q5W188 147 aa8.34□□□□□ -1.08
PTPRA-204ENST00000380393 Q6ZN92 141 aa8.34□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF679Q8IYX0 411 aa8.34□□□□□ -1.08
PTPRA-204ENST00000380393 LINC00471Q8N535 108 aa8.34□□□□□ -1.08
PTPRA-204ENST00000380393 G6PC2Q9NQR9 355 aa8.34□□□□□ -1.08
PTPRA-204ENST00000380393 VSIG4Q9Y279 399 aa8.34□□□□□ -1.08
PTPRA-204ENST00000380393 NYNRINQ9P2P1 1898 aaKnown RBP8.34□□□□□ -1.08
PTPRA-204ENST00000380393 CPSF4LA6NMK7 179 aaKnown RBP8.33□□□□□ -1.08
PTPRA-204ENST00000380393 OR7C2O60412 319 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 PAPLNO95428 1278 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 ETHE1O95571 254 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 LSSP48449 732 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 PDLIM4P50479 330 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 PGGHGQ32M88 737 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF385BQ569K4 471 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 ABHD12BQ7Z5M8 362 aaPredicted RBP8.33□□□□□ -1.08
PTPRA-204ENST00000380393 NIT1Q86X76 327 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 DND1Q8IYX4 353 aaKnown RBP8.33□□□□□ -1.08
PTPRA-204ENST00000380393 APCDD1LQ8NCL9 501 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 LFNGQ8NES3 379 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 OR52L2PQ8NGH6 319 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 OR4S2Q8NH73 311 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 FAM222BQ8WU58 562 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 ATP6V0BQ99437 205 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 PDCD1LG2Q9BQ51 273 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 BET1LQ9NYM9 111 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 ATXN7O15265 892 aaPredicted RBP8.33□□□□□ -1.08
PTPRA-204ENST00000380393 SLC16A5O15375 505 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 RPS20P60866 119 aaKnown RBP8.33□□□□□ -1.08
PTPRA-204ENST00000380393 IL24Q13007 206 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 NFATC2Q13469 925 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 ARTNQ5T4W7 220 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 OR4A47Q6IF82 309 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 TEX43Q6ZNM6 134 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 KLHDC8AQ8IYD2 350 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 C17orf78Q8N4C9 275 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 OR5AK2Q8NH90 309 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 TMEM9BQ9NQ34 198 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 FBXL17Q9UF56 701 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 LAMP3Q9UQV4 416 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 LRP12Q9Y561 859 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.33□□□□□ -1.08
PTPRA-204ENST00000380393 DANCRP0C864 163 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 GLB1P16278 677 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 FAHP16930 419 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF28P17035 718 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 PRPH2P23942 346 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 CXCR1P25024 350 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 RAB9AP51151 201 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 GNB2P62879 340 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 ADAM8P78325 824 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 FAM3AP98173 230 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 MPV17LQ2QL34 196 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 MORN2Q502X0 79 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 METRNLQ641Q3 311 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 RSPO2Q6UXX9 243 aaPredicted RBP8.33□□□□□ -1.08
PTPRA-204ENST00000380393 MEPCEQ7L2J0 689 aaKnown RBP8.33□□□□□ -1.08
PTPRA-204ENST00000380393 SLC25A42Q86VD7 318 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 SAXO1Q8IYX7 474 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 CYB561D1Q8N8Q1 229 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 COX18Q8N8Q8 333 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 CYB561A3Q8NBI2 242 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 MORN4Q8NDC4 146 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 OR51A2Q8NGJ7 313 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 VN1R17PQ8TDU5 208 aa8.33□□□□□ -1.08
PTPRA-204ENST00000380393 RHBDD1Q8TEB9 315 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms