RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 CNN3Q15417 329 aaKnown RBP12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 FAM189A2Q15884 450 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 SCGB2B2Q4G0G5 96 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 GLDNQ6ZMI3 551 aaPredicted RBP12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 NAXEQ8NCW5 288 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 OR56B1Q8NGI3 324 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 GPN1Q9HCN4 374 aaPredicted RBP12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 GHRLQ9UBU3 117 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 FABP7O15540 132 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 XRCC2O43543 280 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 CREBL2O60519 120 aaPredicted RBP12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 ALX3O95076 343 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 TMEM225BP0DP42 221 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 EDN3P14138 238 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 MGMTP16455 207 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 ERP29P30040 261 aaKnown RBP12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 RAB1AP62820 205 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 FAM3AP98173 230 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 STK11Q15831 433 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 NKPD1Q17RQ9 610 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 CLVS2Q5SYC1 327 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 IGFL2Q6UWQ7 119 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 IDO2Q6ZQW0 420 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 SPSB1Q96BD6 273 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 PLSCR3Q9NRY6 295 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 RTTNQ86VV8 2226 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 LOC100509620A0A075B734 347 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 ZNF503-AS2A6NEH8 195 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 NRASP01111 189 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 MELTFP08582 738 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 HIST1H1DP16402 221 aaKnown RBP12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 GZMKP49863 264 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 TNK1Q13470 666 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 RNASE10Q5GAN6 216 aaKnown RBP12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 PLAC9Q5JTB6 97 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 OR52W1Q6IF63 320 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 CRIP3Q6Q6R5 217 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 CD163Q86VB7 1156 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 BPIFB2Q8N4F0 458 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 BORCS8Q96FH0 119 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 CPNE2Q96FN4 548 aaPredicted RBP12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 ARHGAP5-AS1Q96IT6 56 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 TRIB1Q96RU8 372 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 NUDT16L1Q9BRJ7 211 aaKnown RBP12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 C1QTNF5Q9BXJ0 243 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 PRDM14Q9GZV8 571 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 IRF2BPLQ9H1B7 796 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 B3GNT2Q9NY97 397 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 KCNMB2Q9Y691 235 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 ZNF292O60281 2723 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 hCG_38984A0A1B0GV85 526 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 ATP6V1G1O75348 118 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 SULT1A3P0DMM9 295 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 SULT1A4P0DMN0 295 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 NAT2P11245 290 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 PRKACBP22694 351 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 RPS27AP62979 156 aaKnown RBP12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 PLP2Q04941 152 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 CAMK2BQ13554 666 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 RTP5Q14D33 572 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 HIKESHIQ53FT3 197 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 TMEM53Q6P2H8 277 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 GCNT2Q8N0V5 402 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 OR52B4Q8NGK2 314 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 PIGCQ92535 297 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 ATPIF1Q9UII2 106 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 ZNF107Q9UII5 783 aaPredicted RBP12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 SCP2D1Q9UJQ7 156 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 KCNK7Q9Y2U2 307 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 ZNF175Q9Y473 711 aa12.83□□□□□ -0.36
RAB3IP-203ENST00000378809 PTPRBP23467 1997 aa12.82□□□□□ -0.36
RAB3IP-203ENST00000378809 SPENQ96T58 3664 aaKnown RBP12.82□□□□□ -0.36
RAB3IP-203ENST00000378809 ANGPTL7O43827 346 aa12.82□□□□□ -0.36
RAB3IP-203ENST00000378809 ARR3P36575 388 aa12.82□□□□□ -0.36
RAB3IP-203ENST00000378809 RBP2P50120 134 aa12.82□□□□□ -0.36
RAB3IP-203ENST00000378809 ARFRP1Q13795 201 aa12.82□□□□□ -0.36
RAB3IP-203ENST00000378809 CDK10Q15131 360 aa12.82□□□□□ -0.36
RAB3IP-203ENST00000378809 SF3B4Q15427 424 aaKnown RBP eCLIP12.82□□□□□ -0.36
RAB3IP-203ENST00000378809 FBXW9Q5XUX1 488 aa12.82□□□□□ -0.36
RAB3IP-203ENST00000378809 PLCXD3Q63HM9 321 aa12.82□□□□□ -0.36
RAB3IP-203ENST00000378809 TMED4Q7Z7H5 227 aa12.82□□□□□ -0.36
RAB3IP-203ENST00000378809 STEAP2Q8NFT2 490 aa12.82□□□□□ -0.36
RAB3IP-203ENST00000378809 UBE2QL1A1L167 161 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 DISC1C4P0D8 188 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 SPRY1O43609 319 aaPredicted RBP12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 SSX5O60225 188 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 WISP2O76076 250 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 IGHG3P01860 377 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 CSTBP04080 98 aaKnown RBP12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 IL5P05113 134 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 GSTP1P09211 210 aaKnown RBP12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 VSIG10L2P0DP72 767 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 GABRR1P24046 479 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 MPGP29372 298 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 HRH1P35367 487 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 ALDH3B1P43353 468 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 TMEM50BP56557 158 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 IFITM2Q01629 132 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 MEF2DQ14814 521 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 RSU1Q15404 277 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms