RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 RNF223E7ERA6 249 aa15.82■□□□□ 0.12
SSU72-203ENST00000378725 LALBAP00709 142 aa15.82■□□□□ 0.12
SSU72-203ENST00000378725 WNT4P56705 351 aa15.82■□□□□ 0.12
SSU72-203ENST00000378725 SLC3A1Q07837 685 aa15.82■□□□□ 0.12
SSU72-203ENST00000378725 CDK5R1Q15078 307 aa15.82■□□□□ 0.12
SSU72-203ENST00000378725 CEACAM21Q3KPI0 293 aa15.82■□□□□ 0.12
SSU72-203ENST00000378725 FAM76BQ5HYJ3 339 aa15.82■□□□□ 0.12
SSU72-203ENST00000378725 ZDHHC23Q8IYP9 409 aa15.82■□□□□ 0.12
SSU72-203ENST00000378725 CIARTQ8N365 385 aaPredicted RBP15.82■□□□□ 0.12
SSU72-203ENST00000378725 ZNF676Q8N7Q3 588 aa15.82■□□□□ 0.12
SSU72-203ENST00000378725 OR5AK2Q8NH90 309 aa15.82■□□□□ 0.12
SSU72-203ENST00000378725 Q8TCH9 128 aa15.82■□□□□ 0.12
SSU72-203ENST00000378725 YTHDF1Q9BYJ9 559 aaKnown RBP15.82■□□□□ 0.12
SSU72-203ENST00000378725 FGF23Q9GZV9 251 aaPredicted RBP15.82■□□□□ 0.12
SSU72-203ENST00000378725 HHLA2Q9UM44 414 aa15.82■□□□□ 0.12
SSU72-203ENST00000378725 MAST4O15021 2626 aa15.82■□□□□ 0.12
SSU72-203ENST00000378725 H7C1Q1 480 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 MYL12BO14950 172 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 RGS10O43665 173 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 NRASP01111 189 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 CD99P14209 185 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 FOSL1P15407 271 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 GPR6P46095 362 aaPredicted RBP15.81■□□□□ 0.12
SSU72-203ENST00000378725 CDH15P55291 814 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 LOXL1Q08397 574 aaPredicted RBP15.81■□□□□ 0.12
SSU72-203ENST00000378725 MPPED2Q15777 294 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 CLVS2Q5SYC1 327 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 PRAMEF6Q5VXH4 476 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 DMKNQ6E0U4 476 aaPredicted RBP15.81■□□□□ 0.12
SSU72-203ENST00000378725 PRSS48Q7RTY5 328 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 WDR86Q86TI4 376 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 MOGAT3Q86VF5 341 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 OR5A2Q8NGI9 324 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 OR10AC1Q8NH08 325 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 HPSE2Q8WWQ2 592 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 HIST1H2AAQ96QV6 131 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 MICU1Q9BPX6 476 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 PDCD1LG2Q9BQ51 273 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 COMMD4Q9H0A8 199 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 TRIM36Q9NQ86 728 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 BLOC1S6Q9UL45 172 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 LRRC42Q9Y546 428 aa15.81■□□□□ 0.12
SSU72-203ENST00000378725 IGHV3-64DA0A0J9YX35 117 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 CLDN25C9JDP6 229 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 TMEM178BH3BS89 294 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 PPIHO43447 177 aaKnown RBP15.8■□□□□ 0.12
SSU72-203ENST00000378725 LMX1BO60663 402 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 THBS2P35442 1172 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 TAS2R43P59537 309 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 ACSM1Q08AH1 577 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 DOC2BQ14184 412 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 MOB3CQ70IA8 216 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 C11orf53Q8IXP5 236 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 OR1M1Q8NGA1 313 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 OR51A4Q8NGJ6 313 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 ZNF420Q8TAQ5 688 aaPredicted RBP15.8■□□□□ 0.12
SSU72-203ENST00000378725 RNF170Q96K19 258 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 COX4I2Q96KJ9 171 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 RTL8AQ9BWD3 113 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 MND1Q9BWT6 205 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 TLNRD1Q9H1K6 362 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 FN3KRPQ9HA64 309 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 DCAF16Q9NXF7 216 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 LSM2Q9Y333 95 aaKnown RBP15.8■□□□□ 0.12
SSU72-203ENST00000378725 CREBBPQ92793 2442 aa15.8■□□□□ 0.12
SSU72-203ENST00000378725 CHD3Q12873 2000 aaKnown RBP15.79■□□□□ 0.12
SSU72-203ENST00000378725 A6NIN4 97 aa15.79■□□□□ 0.12
SSU72-203ENST00000378725 TMEM210A6NLX4 147 aa15.79■□□□□ 0.12
SSU72-203ENST00000378725 H3BSH0 61 aa15.79■□□□□ 0.12
SSU72-203ENST00000378725 MT-ND2P03891 347 aa15.79■□□□□ 0.12
SSU72-203ENST00000378725 GRPP07492 148 aa15.79■□□□□ 0.12
SSU72-203ENST00000378725 USF1P22415 310 aaPredicted RBP15.79■□□□□ 0.12
SSU72-203ENST00000378725 RBMXP38159 391 aaKnown RBP15.79■□□□□ 0.12
SSU72-203ENST00000378725 BDH1Q02338 343 aa15.79■□□□□ 0.12
SSU72-203ENST00000378725 HNRNPA0Q13151 305 aaKnown RBP15.79■□□□□ 0.12
SSU72-203ENST00000378725 RAB1CQ92928 201 aa15.79■□□□□ 0.12
SSU72-203ENST00000378725 SMIM19Q96E16 107 aa15.79■□□□□ 0.12
SSU72-203ENST00000378725 C18orf12Q96KH6 178 aa15.79■□□□□ 0.12
SSU72-203ENST00000378725 UFSP2Q9NUQ7 469 aa15.79■□□□□ 0.12
SSU72-203ENST00000378725 IGHV4-61A0A0C4DH41 118 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 ANKRD61A6NGH8 418 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 PLPP2O43688 288 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 MRPS14O60783 128 aaKnown RBP15.78■□□□□ 0.12
SSU72-203ENST00000378725 FSTL3O95633 263 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 CD1AP06126 327 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 GABARAPL2P60520 117 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 GNG3P63215 75 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 ZNF154Q13106 437 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 SPHARQ15513 63 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 UBE2V2Q15819 145 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 CEP78Q5JTW2 689 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 PEG10Q86TG7 708 aaKnown RBP15.78■□□□□ 0.12
SSU72-203ENST00000378725 PP6455Q8WZ26 134 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 RGP1Q92546 391 aaPredicted RBP15.78■□□□□ 0.12
SSU72-203ENST00000378725 GHSRQ92847 366 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 FGGYQ96C11 551 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 ADAT3Q96EY9 351 aaPredicted RBP15.78■□□□□ 0.12
SSU72-203ENST00000378725 TIMD4Q96H15 378 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 OR5M11Q96RB7 305 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 CHST5Q9GZS9 411 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms