RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 XRCC3O43542 346 aa13.46□□□□□ -0.25
NPHP4-201ENST00000378156 RGPD4Q7Z3J3 1758 aa13.46□□□□□ -0.25
NPHP4-201ENST00000378156 ZAR1Q86SH2 424 aa13.46□□□□□ -0.25
NPHP4-201ENST00000378156 PTP4A1Q93096 173 aa13.46□□□□□ -0.25
NPHP4-201ENST00000378156 MAP6Q96JE9 813 aa13.46□□□□□ -0.25
NPHP4-201ENST00000378156 MARVELD1Q9BSK0 173 aa13.46□□□□□ -0.25
NPHP4-201ENST00000378156 DCTN6O00399 190 aa13.46□□□□□ -0.25
NPHP4-201ENST00000378156 ANGPTL7O43827 346 aa13.46□□□□□ -0.25
NPHP4-201ENST00000378156 ALOX5APP20292 161 aa13.46□□□□□ -0.25
NPHP4-201ENST00000378156 NPBWR1P48145 328 aa13.46□□□□□ -0.25
NPHP4-201ENST00000378156 ZNF79Q15937 498 aa13.46□□□□□ -0.25
NPHP4-201ENST00000378156 REEP6Q96HR9 211 aa13.46□□□□□ -0.25
NPHP4-201ENST00000378156 RYDENQ9NUL5 291 aaKnown RBP13.46□□□□□ -0.25
NPHP4-201ENST00000378156 GAR1Q9NY12 217 aaKnown RBP13.46□□□□□ -0.25
NPHP4-201ENST00000378156 PI3P19957 117 aa13.46□□□□□ -0.26
NPHP4-201ENST00000378156 CDAP32320 146 aa13.46□□□□□ -0.26
NPHP4-201ENST00000378156 HOXA1P49639 335 aaPredicted RBP13.46□□□□□ -0.26
NPHP4-201ENST00000378156 TFAP2EQ6VUC0 442 aa13.46□□□□□ -0.26
NPHP4-201ENST00000378156 KCNJ15Q99712 375 aa13.46□□□□□ -0.26
NPHP4-201ENST00000378156 FSCN3Q9NQT6 498 aa13.46□□□□□ -0.26
NPHP4-201ENST00000378156 MED9Q9NWA0 146 aa13.46□□□□□ -0.26
NPHP4-201ENST00000378156 FLRT3Q9NZU0 649 aa13.46□□□□□ -0.26
NPHP4-201ENST00000378156 SLCO1B1Q9Y6L6 691 aa13.46□□□□□ -0.26
NPHP4-201ENST00000378156 TRAV17A0A0B4J275 112 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 SCO1O75880 301 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 SEMG1P04279 462 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 OR4E1P0C645 316 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 FCGR2CP31995 323 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 OR2B8PP59922 312 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 RELL2Q8NC24 303 aaPredicted RBP13.45□□□□□ -0.26
NPHP4-201ENST00000378156 A0A1B0GTQ1 180 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 E5RGE8 158 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 GSTP1P09211 210 aaKnown RBP13.45□□□□□ -0.26
NPHP4-201ENST00000378156 ZNF85Q03923 595 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 SSPNQ14714 243 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 ST3GAL2Q16842 350 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 TMEM182Q6ZP80 229 aaPredicted RBP13.45□□□□□ -0.26
NPHP4-201ENST00000378156 H1FXQ92522 213 aaKnown RBP13.45□□□□□ -0.26
NPHP4-201ENST00000378156 NSG2Q9Y328 171 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 SDCBPO00560 298 aaPredicted RBP13.45□□□□□ -0.26
NPHP4-201ENST00000378156 NME2P1O60361 137 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 RPL12P30050 165 aaKnown RBP13.45□□□□□ -0.26
NPHP4-201ENST00000378156 SIGLEC14Q08ET2 396 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 WDR74Q6RFH5 385 aaPredicted RBP13.45□□□□□ -0.26
NPHP4-201ENST00000378156 LHFPL2Q6ZUX7 228 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 GALNT16Q8N428 558 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 OR1J1Q8NGS3 322 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 FOXB1Q99853 325 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 WFDC6Q9BQY6 131 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 VPS25Q9BRG1 176 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 ZNF586Q9NXT0 402 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 MYO16Q9Y6X6 1858 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 TRGV5A0A0B4J1U4 118 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 IGHV3-64DA0A0J9YX35 117 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 NKX6-3A6NJ46 265 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 IL5P05113 134 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 CT45A6P0DMU7 189 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 CT45A5P0DMU8 189 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 CT45A7P0DMV0 189 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 CT45A8P0DMV1 189 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 CT45A9P0DMV2 189 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 GLI4P10075 376 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 CT45A2Q5DJT8 189 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 CT45A1Q5HYN5 189 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 WDR38Q5JTN6 314 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 FAM162BQ5T6X4 162 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 ZNF573Q86YE8 665 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 CT45A3Q8NHU0 189 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 FBLIM1Q8WUP2 373 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 MOGAT1Q96PD6 335 aa13.45□□□□□ -0.26
NPHP4-201ENST00000378156 CENPVL1A0A0U1RR11 272 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 SLC17A2O00624 439 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 BCL2L11O43521 198 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 D2HGDHQ8N465 521 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 SLC38A9Q8NBW4 561 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 AKR7LQ8NHP1 331 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 RDH5Q92781 318 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 HEYLQ9NQ87 328 aaPredicted RBP13.44□□□□□ -0.26
NPHP4-201ENST00000378156 hCG_1809904A0A1W2PP81 198 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 A0A1W2PPE2 198 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 A0A1W2PR64 198 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 A0A1W2PRV1 198 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 ZNF727A8MUV8 499 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 PLA2G10O15496 165 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 KLK10O43240 276 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 ZNF354AO60765 605 aaPredicted RBP13.44□□□□□ -0.26
NPHP4-201ENST00000378156 PSG6Q00889 435 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 SLC25A30Q5SVS4 291 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 ZNF770Q6IQ21 691 aaPredicted RBP13.44□□□□□ -0.26
NPHP4-201ENST00000378156 RPUSD3Q6P087 351 aaKnown RBP13.44□□□□□ -0.26
NPHP4-201ENST00000378156 BTNL8Q6UX41 500 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 LSRQ86X29 649 aaPredicted RBP13.44□□□□□ -0.26
NPHP4-201ENST00000378156 COMMD1Q8N668 190 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 DEFB124Q8NES8 71 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 OR8U1Q8NH10 309 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 ZFP64Q9NPA5 681 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 CLEC1BQ9P126 229 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 SVILO95425 2214 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 IGHA1P01876 353 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 IGHV4-34P06331 123 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms