RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 SCGB1D2O95969 90 aa13.87□□□□□ -0.19
CSNK1A1-202ENST00000377843 RNH1P13489 461 aaKnown RBP13.87□□□□□ -0.19
CSNK1A1-202ENST00000377843 CCR4P51679 360 aa13.87□□□□□ -0.19
CSNK1A1-202ENST00000377843 INSM1Q01101 510 aaPredicted RBP13.87□□□□□ -0.19
CSNK1A1-202ENST00000377843 ZNF77Q15935 545 aa13.87□□□□□ -0.19
CSNK1A1-202ENST00000377843 HIKESHIQ53FT3 197 aa13.87□□□□□ -0.19
CSNK1A1-202ENST00000377843 HIST2H3PS2Q5TEC6 136 aa13.87□□□□□ -0.19
CSNK1A1-202ENST00000377843 LRRC18Q8N456 261 aa13.87□□□□□ -0.19
CSNK1A1-202ENST00000377843 FAM213BQ8TBF2 198 aa13.87□□□□□ -0.19
CSNK1A1-202ENST00000377843 VSTM2LQ96N03 204 aa13.87□□□□□ -0.19
CSNK1A1-202ENST00000377843 GINS3Q9BRX5 216 aa13.87□□□□□ -0.19
CSNK1A1-202ENST00000377843 ABHD14AQ9BUJ0 271 aa13.87□□□□□ -0.19
CSNK1A1-202ENST00000377843 PBDC1Q9BVG4 233 aa13.87□□□□□ -0.19
CSNK1A1-202ENST00000377843 SOX15O60248 233 aa13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 WISP1O95388 367 aa13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 CTLA4P16410 223 aa13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 PPM1AP35813 382 aa13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 UBE2KP61086 200 aa13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 HNRNPA1L2Q32P51 320 aaKnown RBP13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 HSD17B11Q8NBQ5 300 aa13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 LPAR5Q9H1C0 372 aa13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 CYTIPO60759 359 aa13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 EMP2P54851 167 aa13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 AKR1C8PQ5T2L2 129 aa13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 PLXDC2Q6UX71 529 aa13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 TMEM182Q6ZP80 229 aaPredicted RBP13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 NKAIN3Q8N8D7 197 aa13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 MRPL24Q96A35 216 aaKnown RBP13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 ADAT3Q96EY9 351 aaPredicted RBP13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 LRRC3BQ96PB8 259 aa13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 MEMO1Q9Y316 297 aa13.86□□□□□ -0.19
CSNK1A1-202ENST00000377843 CCDC187A0A096LP49 1063 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 IGLV1-36A0A0B4J1U3 117 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 A0A1W2PP11 408 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 SMCO3A2RU48 225 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 SYT7O43581 403 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 TMEM50BP56557 158 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 SNX22Q96L94 193 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 DDA1Q9BW61 102 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 FOXQ1Q9C009 403 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 OR52A1Q9UKL2 312 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 R4GMQ9 66 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 TLCD2A6NGC4 264 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 PRR19A6NJB7 356 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 TMEM14DPA8MWL7 114 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 ADAM10O14672 748 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 GMFGO60234 142 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 OR6A2O95222 327 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 APBB3O95704 486 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 BPNT1O95861 308 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 PGA4P0DJD7 388 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 PGA5P0DJD9 388 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 SUCLG1P53597 346 aaKnown RBP13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 JOSD1Q15040 202 aaPredicted RBP13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 C9orf50Q5SZB4 431 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 KREMEN2Q8NCW0 462 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 NAXEQ8NCW5 288 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 FLVCR1-AS1Q8TAF5 88 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 LYRM4Q9HD34 91 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 OR14J1Q9UGF5 321 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 TUBD1Q9UJT1 453 aa13.85□□□□□ -0.19
CSNK1A1-202ENST00000377843 A0A087WWC5 75 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 A0A1B0GW64 132 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 TGFBR3LH3BV60 316 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 K7N7A8 449 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 XRCC2O43543 280 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 OR5H8P0DN80 308 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 MDKP21741 143 aaPredicted RBP13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 GNALP38405 381 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 CD200P41217 278 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 P2RY1P47900 373 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 ASCL1P50553 236 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 ELAVL3Q14576 367 aaKnown RBP13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 VITQ6UXI7 678 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 CHRDL2Q6WN34 429 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 OR9A4Q8NGU2 314 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 OR5H2Q8NGV7 314 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 RAB24Q969Q5 203 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 CDCA3Q99618 268 aaPredicted RBP13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 SNHG12Q9BXW3 62 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 BANF2Q9H503 90 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 FOXD3Q9UJU5 478 aaPredicted RBP13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 KCNIP3Q9Y2W7 256 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 TRBV23OR9-2A0A075B6M9 112 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 FIGNL2A6NMB9 653 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 BGLAPP02818 100 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 CT45A8P0DMV1 189 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 CT45A9P0DMV2 189 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 BCKDHBP21953 392 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 BTG2P78543 158 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 ZNHIT3Q15649 155 aaPredicted RBP13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 CT45A2Q5DJT8 189 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 CDCP2Q5VXM1 449 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 WBP2NLQ6ICG8 309 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 KCTD18Q6PI47 426 aaPredicted RBP13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 GALNTL5Q7Z4T8 443 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 FAM160A2Q8N612 972 aaPredicted RBP13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 BCORP1Q8N888 145 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 OR52N5Q8NH56 324 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 ST6GALNAC5Q9BVH7 336 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms