RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 GPR84Q9NQS5 396 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 CTSZQ9UBR2 303 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 DNAJB11Q9UBS4 358 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 WARS2Q9UGM6 360 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 POLR3KQ9Y2Y1 108 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 MPC1Q9Y5U8 109 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 A0A0U1RQV5 110 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 ACOD1A6NK06 481 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 H3BNX3 289 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 TMPRSS2O15393 492 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 FSTL3O95633 263 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 CST4P01036 141 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 KRT8P05787 483 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 NPY4RP50391 375 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 GPM6AP51674 278 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 ACTG1P63261 375 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 EGR3Q06889 387 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 RIPPLY1Q0D2K3 151 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 MICBQ29980 383 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 ODF4Q2M2E3 257 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 DMRTC1Q5HYR2 192 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 PLCXD3Q63HM9 321 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 WDR82Q6UXN9 313 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 RBMS3Q6XE24 437 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 MOB3CQ70IA8 216 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 FAM90A1Q86YD7 464 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 GALNT4Q8N4A0 578 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 OR8J1Q8NGP2 316 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 OR5P3Q8WZ94 311 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 ST8SIA4Q92187 359 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 PPP1R14AQ96A00 147 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 JMJD8Q96S16 334 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 MS4A7Q9GZW8 240 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 RASSF4Q9H2L5 321 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 MOB1AQ9H8S9 216 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 RNPEPL1Q9HAU8 725 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 NUP50Q9UKX7 468 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 PIGLQ9Y2B2 252 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 R4GMQ9 66 aa9.64□□□□□ -0.87
SMARCE1-203ENST00000377808 A0A0A6YYJ9 748 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 TRAV40A0A0B4J280 105 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 A0A1W2PQL4 384 aaPredicted RBP9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 TMEM210A6NLX4 147 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 ZNF732B4DXR9 585 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 H3BSH0 61 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 P2RY10O00398 339 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 NDUFA2O43678 99 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 ENSAO43768 121 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 MTRF1O75570 445 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 ALPLP05186 524 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 FAHP16930 419 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 DCTDP32321 178 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 PSMB10P40306 273 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 ALDH3A2P51648 485 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 EFNB1P98172 346 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 PAX8Q06710 450 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 IKZF1Q13422 519 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 CD276Q5ZPR3 534 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 SSX6Q7RTT6 188 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 FAM220AQ7Z4H9 259 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 C11orf53Q8IXP5 236 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 CBR4Q8N4T8 237 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 HPSE2Q8WWQ2 592 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 RFKQ969G6 155 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 EME1Q96AY2 570 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 SEH1LQ96EE3 360 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 CCL13Q99616 98 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 S100A14Q9HCY8 104 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 SNTG1Q9NSN8 517 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 HAO2Q9NYQ3 351 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 NUFIP1Q9UHK0 495 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 MRM2Q9UI43 246 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 ENPP5Q9UJA9 477 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 OR52A1Q9UKL2 312 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 SNX5Q9Y5X3 404 aa9.63□□□□□ -0.87
SMARCE1-203ENST00000377808 A0A1B0GW55 424 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 A6NIN4 97 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 NKX6-3A6NJ46 265 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 C22orf46C9J442 243 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 TRIM77I1YAP6 450 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 AKR7A2O43488 359 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 DHRS3O75911 302 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 BAG2O95816 211 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 FSHBP01225 129 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 LHBP01229 141 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 TTRP02766 147 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 OR2T7P0C7T2 308 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 DUX4L2P0CJ85 424 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 DUX4L3P0CJ86 424 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 DUX4L4P0CJ87 422 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 DUX4L5P0CJ88 424 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 DUX4L6P0CJ89 424 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 DUX4L7P0CJ90 424 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 IGHV4-38-2P0DP08 117 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 MUC1P15941 1255 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 HILS1P60008 231 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 FGF12P61328 243 aa9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 ELF3P78545 371 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-203ENST00000377808 KLF17Q5JT82 389 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms