RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 DNAAF1Q8NEP3 725 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 OR8S1Q8NH09 359 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 LILRB1Q8NHL6 650 aaPredicted RBP11.07□□□□□ -0.64
CBWD3-203ENST00000377344 PIGTQ969N2 578 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 HIST1H2AAQ96QV6 131 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 MSL2Q9HCI7 577 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 TMEM100Q9NV29 134 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 IGLV3-9A0A075B6K5 115 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 FAM230AA0A1W2PPH8 454 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 IL1AP01583 271 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 ERCC1P07992 297 aaPredicted RBP11.07□□□□□ -0.64
CBWD3-203ENST00000377344 ATF1P18846 271 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 BDKRB2P30411 391 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 CAV3P56539 151 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 OR10A3P58181 314 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 TMEM42Q69YG0 159 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 LRRTM1Q86UE6 522 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 JAGN1Q8N5M9 183 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 ACBD4Q8NC06 268 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 UBASH3BQ8TF42 649 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 SPACA5Q96QH8 159 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 SLC30A2Q9BRI3 323 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 ADAT1Q9BUB4 502 aaKnown RBP11.07□□□□□ -0.64
CBWD3-203ENST00000377344 TMEM138Q9NPI0 162 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 SLC7A11Q9UPY5 501 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 MPC1Q9Y5U8 109 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 TENM4Q6N022 2769 aa11.06□□□□□ -0.64
CBWD3-203ENST00000377344 IGKV1-9A0A0C4DH69 117 aa11.06□□□□□ -0.64
CBWD3-203ENST00000377344 ADRA2CP18825 462 aa11.06□□□□□ -0.64
CBWD3-203ENST00000377344 AZGP1P25311 298 aaKnown RBP11.06□□□□□ -0.64
CBWD3-203ENST00000377344 ALDH3B1P43353 468 aa11.06□□□□□ -0.64
CBWD3-203ENST00000377344 OR8G1Q15617 311 aa11.06□□□□□ -0.64
CBWD3-203ENST00000377344 MOGQ16653 247 aa11.06□□□□□ -0.64
CBWD3-203ENST00000377344 DDI2Q5TDH0 399 aa11.06□□□□□ -0.64
CBWD3-203ENST00000377344 OR10AD1Q8NGE0 317 aa11.06□□□□□ -0.64
CBWD3-203ENST00000377344 FBXW5Q969U6 566 aa11.06□□□□□ -0.64
CBWD3-203ENST00000377344 TECTBQ96PL2 329 aa11.06□□□□□ -0.64
CBWD3-203ENST00000377344 NKX3-1Q99801 234 aaPredicted RBP11.06□□□□□ -0.64
CBWD3-203ENST00000377344 DHRS9Q9BPW9 319 aa11.06□□□□□ -0.64
CBWD3-203ENST00000377344 NEK6Q9HC98 313 aa11.06□□□□□ -0.64
CBWD3-203ENST00000377344 H0YL77 283 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 ZNF182P17025 639 aaPredicted RBP11.05□□□□□ -0.64
CBWD3-203ENST00000377344 MMP15P51511 669 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 GPM6AP51674 278 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 HNRNPA0Q13151 305 aaKnown RBP11.05□□□□□ -0.64
CBWD3-203ENST00000377344 CEACAM21Q3KPI0 293 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 GLT8D1Q68CQ7 371 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 ZNF529Q6P280 563 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 FBXL14Q8N1E6 418 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 MUC15Q8N387 334 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 OR52N4Q8NGI2 321 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 OR13G1Q8NGZ3 307 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 GTF3AQ92664 365 aaKnown RBP11.05□□□□□ -0.64
CBWD3-203ENST00000377344 BORCS8Q96FH0 119 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 GPER1Q99527 375 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 V9GY05 133 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 UTP20O75691 2785 aaKnown RBP11.05□□□□□ -0.64
CBWD3-203ENST00000377344 MEGF11A6BM72 1044 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 PRKACBP22694 351 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 SOX6P35712 828 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 ZNF93P35789 620 aaPredicted RBP11.05□□□□□ -0.64
CBWD3-203ENST00000377344 ZNF81P51508 661 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 CNPY1Q3B7I2 92 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 Q6ZR03 302 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 NR2C2APQ86WQ0 139 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 NKAIN3Q8N8D7 197 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 OR2Z1Q8NG97 314 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 DYNC2LI1Q8TCX1 351 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 OR5P3Q8WZ94 311 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 RFT1Q96AA3 541 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 SLC25A46Q96AG3 418 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 SPSB1Q96BD6 273 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 ITPKCQ96DU7 683 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 RNF170Q96K19 258 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 GFI1Q99684 422 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 SLC22A4Q9H015 551 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 UBTD1Q9HAC8 227 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 PLGRKTQ9HBL7 147 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 DYNLRB1Q9NP97 96 aa11.05□□□□□ -0.64
CBWD3-203ENST00000377344 CGGBP1Q9UFW8 167 aaPredicted RBP11.05□□□□□ -0.64
CBWD3-203ENST00000377344 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.04□□□□□ -0.64
CBWD3-203ENST00000377344 IGHV3-64DA0A0J9YX35 117 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 A0A1W2PPR1 153 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 ZSCAN5BA6NJL1 495 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 ZNF732B4DXR9 585 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 HS3ST1O14792 307 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 SPRY3O43610 288 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 ALX3O95076 343 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 NAT2P11245 290 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 COL8A1P27658 744 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 RBP2P50120 134 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 RORCP51449 518 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 PSMD7P51665 324 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 FUT6P51993 359 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 MTCP1P56278 107 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 HES5Q5TA89 166 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 OR5A2Q8NGI9 324 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 HPSE2Q8WWQ2 592 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 MICU1Q9BPX6 476 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 RTL8AQ9BWD3 113 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms