RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 OR8B8Q15620 311 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 GABRA6Q16445 453 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 HIKESHIQ53FT3 197 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 VWA1Q6PCB0 445 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 MEX3BQ6ZN04 569 aaKnown RBP18.28■□□□□ 0.52
HLA-C-201ENST00000376228 KRT74Q7RTS7 529 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 ZNF584Q8IVC4 421 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 GABRG1Q8N1C3 465 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 C19orf18Q8NEA5 215 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 TRIM63Q969Q1 353 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 CNTD2Q9H8S5 307 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 TBCCD1Q9NVR7 557 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 PIGLQ9Y2B2 252 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 ITPR2Q14571 2701 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 FBN2P35556 2912 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 A0A0A6YYH2 397 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 IGKV1-9A0A0C4DH69 117 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 TMEM272A0A1B0GTI8 110 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 hCG_38984A0A1B0GV85 526 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 A6NIN4 97 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 A6NJ64 397 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 XRCC3O43542 346 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 BPNT1O95861 308 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 TMIGD3P0DMS9 266 aaPredicted RBP18.28■□□□□ 0.52
HLA-C-201ENST00000376228 ZNF93P35789 620 aaPredicted RBP18.28■□□□□ 0.52
HLA-C-201ENST00000376228 TMEM42Q69YG0 159 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 GDPD3Q7L5L3 318 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 OR4D6Q8NGJ1 314 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 RFT1Q96AA3 541 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 APOBEC3DQ96AK3 386 aaPredicted RBP18.28■□□□□ 0.52
HLA-C-201ENST00000376228 STARD4Q96DR4 205 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 THAP7Q9BT49 309 aaPredicted RBP18.28■□□□□ 0.52
HLA-C-201ENST00000376228 PROCRQ9UNN8 238 aa18.28■□□□□ 0.52
HLA-C-201ENST00000376228 NAV2Q8IVL1 2488 aa18.27■□□□□ 0.52
HLA-C-201ENST00000376228 J3QW42 95 aa18.27■□□□□ 0.51
HLA-C-201ENST00000376228 MAGEB3O15480 346 aa18.27■□□□□ 0.51
HLA-C-201ENST00000376228 PLA2G10O15496 165 aa18.27■□□□□ 0.51
HLA-C-201ENST00000376228 PTH2RP49190 550 aa18.27■□□□□ 0.51
HLA-C-201ENST00000376228 FAM3AP98173 230 aa18.27■□□□□ 0.51
HLA-C-201ENST00000376228 TNK1Q13470 666 aa18.27■□□□□ 0.51
HLA-C-201ENST00000376228 SNTB1Q13884 538 aaKnown RBP18.27■□□□□ 0.51
HLA-C-201ENST00000376228 P2RY6Q15077 328 aa18.27■□□□□ 0.51
HLA-C-201ENST00000376228 OR2AE1Q8NHA4 323 aa18.27■□□□□ 0.51
HLA-C-201ENST00000376228 SMIM4Q8WVI0 70 aa18.27■□□□□ 0.51
HLA-C-201ENST00000376228 DIABLOQ9NR28 239 aa18.27■□□□□ 0.51
HLA-C-201ENST00000376228 CSMD2Q7Z408 3487 aa18.26■□□□□ 0.51
HLA-C-201ENST00000376228 CTAG2O75638 210 aa18.26■□□□□ 0.51
HLA-C-201ENST00000376228 FAHP16930 419 aa18.26■□□□□ 0.51
HLA-C-201ENST00000376228 CDK2P24941 298 aa18.26■□□□□ 0.51
HLA-C-201ENST00000376228 ACKR3P25106 362 aa18.26■□□□□ 0.51
HLA-C-201ENST00000376228 ALDH3B1P43353 468 aa18.26■□□□□ 0.51
HLA-C-201ENST00000376228 MADCAM1Q13477 382 aa18.26■□□□□ 0.51
HLA-C-201ENST00000376228 DNM1P46Q6ZS02 220 aa18.26■□□□□ 0.51
HLA-C-201ENST00000376228 MDP1Q86V88 176 aa18.26■□□□□ 0.51
HLA-C-201ENST00000376228 C17orf78Q8N4C9 275 aa18.26■□□□□ 0.51
HLA-C-201ENST00000376228 OPA3Q9H6K4 179 aa18.26■□□□□ 0.51
HLA-C-201ENST00000376228 NEK6Q9HC98 313 aa18.26■□□□□ 0.51
HLA-C-201ENST00000376228 ZNF629Q9UEG4 869 aaPredicted RBP18.26■□□□□ 0.51
HLA-C-201ENST00000376228 MAST4O15021 2626 aa18.26■□□□□ 0.51
HLA-C-201ENST00000376228 C5orf49A4QMS7 147 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 ICMTO60725 284 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 UBBP0CG47 229 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 APLNRP35414 380 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 GSK3AP49840 483 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 QRFPP83859 136 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 ZNF92Q03936 586 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 UBE2V2Q15819 145 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 TMEM69Q5SWH9 247 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 BEND4Q6ZU67 534 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 YIPF5Q969M3 257 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 SPSB1Q96BD6 273 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 TECTBQ96PL2 329 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 SPOCK3Q9BQ16 436 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 REPIN1Q9BWE0 567 aaKnown RBP18.25■□□□□ 0.51
HLA-C-201ENST00000376228 OBP2BQ9NPH6 170 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 GHRLQ9UBU3 117 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 RAB22AQ9UL26 194 aa18.25■□□□□ 0.51
HLA-C-201ENST00000376228 CIB4A0PJX0 185 aa18.24■□□□□ 0.51
HLA-C-201ENST00000376228 EEF1E1-BLOC1S5C9J1V9 151 aa18.24■□□□□ 0.51
HLA-C-201ENST00000376228 GABARAPH6UMI1 98 aa18.24■□□□□ 0.51
HLA-C-201ENST00000376228 EEF1E1O43324 174 aaKnown RBP18.24■□□□□ 0.51
HLA-C-201ENST00000376228 ZNF14P17017 642 aaPredicted RBP18.24■□□□□ 0.51
HLA-C-201ENST00000376228 IGFBP2P18065 325 aa18.24■□□□□ 0.51
HLA-C-201ENST00000376228 EFNB2P52799 333 aa18.24■□□□□ 0.51
HLA-C-201ENST00000376228 UBE2NP61088 152 aaKnown RBP18.24■□□□□ 0.51
HLA-C-201ENST00000376228 PLA2G7Q13093 441 aa18.24■□□□□ 0.51
HLA-C-201ENST00000376228 OR2W3Q7Z3T1 314 aa18.24■□□□□ 0.51
HLA-C-201ENST00000376228 ZNF295-AS1Q8N0V1 137 aa18.24■□□□□ 0.51
HLA-C-201ENST00000376228 DTX3Q8N9I9 347 aa18.24■□□□□ 0.51
HLA-C-201ENST00000376228 ACBD4Q8NC06 268 aa18.24■□□□□ 0.51
HLA-C-201ENST00000376228 ITPKCQ96DU7 683 aa18.24■□□□□ 0.51
HLA-C-201ENST00000376228 SLC22A4Q9H015 551 aa18.24■□□□□ 0.51
HLA-C-201ENST00000376228 MRPS7Q9Y2R9 242 aaKnown RBP18.24■□□□□ 0.51
HLA-C-201ENST00000376228 GGT3PA6NGU5 568 aa18.23■□□□□ 0.51
HLA-C-201ENST00000376228 HCKP08631 526 aa18.23■□□□□ 0.51
HLA-C-201ENST00000376228 RFX2P48378 723 aa18.23■□□□□ 0.51
HLA-C-201ENST00000376228 TAS2R20P59543 309 aa18.23■□□□□ 0.51
HLA-C-201ENST00000376228 TAB1Q15750 504 aa18.23■□□□□ 0.51
HLA-C-201ENST00000376228 CLVS2Q5SYC1 327 aa18.23■□□□□ 0.51
HLA-C-201ENST00000376228 CRIP3Q6Q6R5 217 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms