RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 FAM69BQ5VUD6 431 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 PMS2CLQ68D20 193 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 OPN5Q6U736 354 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 MDGA2Q7Z553 956 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 HSD17B11Q8NBQ5 300 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 SNIP1Q8TAD8 396 aaKnown RBP10.8□□□□□ -0.68
C9orf3-203ENST00000375315 Q8WTZ3 238 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 ZNRF4Q8WWF5 429 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 NMNAT3Q96T66 252 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 SCRT1Q9BWW7 348 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 PARP12Q9H0J9 701 aaKnown RBP10.8□□□□□ -0.68
C9orf3-203ENST00000375315 ZMAT3Q9HA38 289 aaKnown RBP10.8□□□□□ -0.68
C9orf3-203ENST00000375315 IKZF2Q9UKS7 526 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 FBXO7Q9Y3I1 522 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 IGHV1OR21-1A0A087WYE8 117 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 H3BSH0 61 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 M0R296 226 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 CAMLGP49069 296 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 ELOBQ15370 118 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 SHBQ15464 509 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 MRPL2Q5T653 305 aaKnown RBP10.8□□□□□ -0.68
C9orf3-203ENST00000375315 PHF19Q5T6S3 580 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 DGAT2L6Q6ZPD8 337 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 NAXEQ8NCW5 288 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 MFSD8Q8NHS3 518 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 GRHL3Q8TE85 626 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 HIST1H2BLQ99880 126 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 SLC25A31Q9H0C2 315 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 PLA2G2EQ9NZK7 142 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 EML5Q05BV3 1969 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 OR4C45A6NMZ5 311 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 CYB5BO43169 146 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 CRTAPO75718 401 aaPredicted RBP10.8□□□□□ -0.68
C9orf3-203ENST00000375315 TAGLN2P37802 199 aaKnown RBP10.8□□□□□ -0.68
C9orf3-203ENST00000375315 GNG10P50151 68 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 GAGE1Q13065 139 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 RAB32Q13637 225 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 RPUSD3Q6P087 351 aaKnown RBP10.8□□□□□ -0.68
C9orf3-203ENST00000375315 OR10AC1Q8NH08 325 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 MCHR2Q969V1 340 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 SERINC2Q96SA4 455 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 SNHG12Q9BXW3 62 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 MRM2Q9UI43 246 aaKnown RBP10.8□□□□□ -0.68
C9orf3-203ENST00000375315 MEMO1Q9Y316 297 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 SPACA6W5XKT8 324 aa10.8□□□□□ -0.68
C9orf3-203ENST00000375315 A0A087WWC5 75 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 TMEM269A0A1B0GVZ9 245 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 TNFSF14O43557 240 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 DOK2O60496 412 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 DBIP07108 87 aaKnown RBP10.79□□□□□ -0.68
C9orf3-203ENST00000375315 CXCL1P09341 107 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 TRGC1P0CF51 173 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 GIMD1P0DJR0 217 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 LRRC25Q8N386 305 aaPredicted RBP10.79□□□□□ -0.68
C9orf3-203ENST00000375315 BHLHE23Q8NDY6 225 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 OR51F2Q8NH61 342 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 SLC25A43Q8WUT9 341 aaPredicted RBP10.79□□□□□ -0.68
C9orf3-203ENST00000375315 MRGPRFQ96AM1 343 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 C2orf50Q96LR7 162 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 ZNF587Q96SQ5 575 aaPredicted RBP10.79□□□□□ -0.68
C9orf3-203ENST00000375315 ARRDC1-AS1Q9H2J1 176 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 METTL8Q9H825 291 aaKnown RBP10.79□□□□□ -0.68
C9orf3-203ENST00000375315 MAP1BP46821 2468 aaKnown RBP10.79□□□□□ -0.68
C9orf3-203ENST00000375315 TGOLN2O43493 480 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 CT62P0C5K7 136 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 METTL15P1P0C7V9 234 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 ZNF10P21506 573 aaPredicted RBP10.79□□□□□ -0.68
C9orf3-203ENST00000375315 TSFMP43897 325 aaKnown RBP10.79□□□□□ -0.68
C9orf3-203ENST00000375315 RASGEF1BQ0VAM2 473 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 ARHGAP11BQ3KRB8 267 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 TMEM128Q5BJH2 165 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 SLC16A9Q7RTY1 509 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 NPEPL1Q8NDH3 523 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 SLC25A36Q96CQ1 311 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 TM4SF19Q96DZ7 209 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 GNRHR2Q96P88 292 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 TMEM208Q9BTX3 173 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 ALG12Q9BV10 488 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 ACTR3CQ9C0K3 210 aaPredicted RBP10.79□□□□□ -0.68
C9orf3-203ENST00000375315 PNO1Q9NRX1 252 aaKnown RBP10.79□□□□□ -0.68
C9orf3-203ENST00000375315 CES1P1Q9UKY3 287 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 URGCP-MRPS24S4R325 110 aa10.79□□□□□ -0.68
C9orf3-203ENST00000375315 CENPVL1A0A0U1RR11 272 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 FITM1A5D6W6 292 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 ZNF727A8MUV8 499 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 C10orf142B7Z368 130 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 DUX1O43812 170 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 SOX15O60248 233 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 TXNDC12O95881 172 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 GZMBP10144 247 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 CCKBRP32239 447 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 ISXQ2M1V0 245 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 MFSD12Q6NUT3 480 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 FOXRED2Q8IWF2 684 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 CA13Q8N1Q1 262 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 KDM8Q8N371 416 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 JAGN1Q8N5M9 183 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 LFNGQ8NES3 379 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 OR51A4Q8NGJ6 313 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 RNF128Q8TEB7 428 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms