RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SPATA45Q537H7 98 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 ZNF542PQ5EBM4 170 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 OR1L6Q8NGR2 347 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 UQCR10Q9UDW1 63 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 G3V3Y1 287 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 FPR2P25090 351 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 BRS3P32247 399 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 OR1L4Q8NGR5 311 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 RAB40CQ96S21 281 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 P4HTMQ9NXG6 502 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 ZFP30Q9Y2G7 519 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 TMED7-TICAM2A0A0A6YYA0 188 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 LMX1BO60663 402 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 PGA4P0DJD7 388 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 PGA5P0DJD9 388 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 FAM3BP58499 235 aaPredicted RBP13.84□□□□□ -0.19
COL5A1-201ENST00000371817 RBM45Q8IUH3 476 aaKnown RBP13.84□□□□□ -0.19
COL5A1-201ENST00000371817 ISG20L2Q9H9L3 353 aaKnown RBP13.84□□□□□ -0.19
COL5A1-201ENST00000371817 PIPOXQ9P0Z9 390 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 TMED7Q9Y3B3 224 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 NWD2Q9ULI1 1742 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 LOC107984156A0A0G2JMH3 177 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 ZC3H12DA2A288 527 aaKnown RBP13.84□□□□□ -0.19
COL5A1-201ENST00000371817 MELTFP08582 738 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 PLA1AQ53H76 456 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 CLEC14AQ86T13 490 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 ARL17AQ8IVW1 177 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 SYS1Q8N2H4 156 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 MUC20Q8N307 709 aaPredicted RBP13.84□□□□□ -0.19
COL5A1-201ENST00000371817 EID2BQ96D98 161 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 A0A0G2JLL6 359 aaPredicted RBP13.84□□□□□ -0.19
COL5A1-201ENST00000371817 MFNGO00587 321 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 CDK5R1Q15078 307 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 Q56UQ5 140 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 MED25Q71SY5 747 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 PRRT2Q7Z6L0 340 aaPredicted RBP13.84□□□□□ -0.19
COL5A1-201ENST00000371817 TGIF2LXQ8IUE1 241 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 OR10G8Q8NGN5 311 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 ECM29Q5VYK3 1845 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 OR5B21A6NL26 309 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 PHLPP1O60346 1717 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 RPL27P61353 136 aaKnown RBP13.84□□□□□ -0.19
COL5A1-201ENST00000371817 SLC35G1Q2M3R5 365 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 BHLHE23Q8NDY6 225 aa13.84□□□□□ -0.19
COL5A1-201ENST00000371817 ISG20Q96AZ6 181 aaKnown RBP13.84□□□□□ -0.19
COL5A1-201ENST00000371817 FGF18O76093 207 aa13.83□□□□□ -0.19
COL5A1-201ENST00000371817 ADRA1AP35348 466 aa13.83□□□□□ -0.19
COL5A1-201ENST00000371817 COMPP49747 757 aaPredicted RBP13.83□□□□□ -0.19
COL5A1-201ENST00000371817 ZNF600Q6ZNG1 722 aa13.83□□□□□ -0.19
COL5A1-201ENST00000371817 GUSBP08236 651 aa13.83□□□□□ -0.19
COL5A1-201ENST00000371817 AFMIDQ63HM1 303 aa13.83□□□□□ -0.19
COL5A1-201ENST00000371817 OIT3Q8WWZ8 545 aa13.83□□□□□ -0.19
COL5A1-201ENST00000371817 MASP2O00187 686 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 HRO43593 1189 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 TRILQ7L0X0 811 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 KMT5CQ86Y97 462 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 OR8A1Q8NGG7 326 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 SLC45A2Q9UMX9 530 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 COA3Q9Y2R0 106 aaPredicted RBP13.83□□□□□ -0.2
COL5A1-201ENST00000371817 PRDX1Q06830 199 aaKnown RBP13.83□□□□□ -0.2
COL5A1-201ENST00000371817 CD300CQ08708 224 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 FAM169BQ8N8A8 192 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 NEIL1Q96FI4 390 aaPredicted RBP13.83□□□□□ -0.2
COL5A1-201ENST00000371817 DDA1Q9BW61 102 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 RTL8AQ9BWD3 113 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 SLC25A5P05141 298 aaKnown RBP13.83□□□□□ -0.2
COL5A1-201ENST00000371817 PRTGQ2VWP7 1150 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 ASTLQ6HA08 431 aaPredicted RBP13.83□□□□□ -0.2
COL5A1-201ENST00000371817 H1FNTQ75WM6 255 aaPredicted RBP13.83□□□□□ -0.2
COL5A1-201ENST00000371817 EDARADDQ8WWZ3 215 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 GALMQ96C23 342 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 RNF2Q99496 336 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 PCNX2A6NKB5 2137 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 TSPAN13O95857 204 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 RHOBP62745 196 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 SOX4Q06945 474 aaPredicted RBP13.83□□□□□ -0.2
COL5A1-201ENST00000371817 HINT3Q9NQE9 182 aaKnown RBP13.83□□□□□ -0.2
COL5A1-201ENST00000371817 C9orf170A2RU37 121 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 C7orf77A4D0Y5 90 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 ACSM5Q6NUN0 579 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 ASIC5Q9NY37 505 aa13.83□□□□□ -0.2
COL5A1-201ENST00000371817 A0A1W2PN81 502 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 ERASQ7Z444 233 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 LIPGQ9Y5X9 500 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 OR2T8A6NH00 312 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 TMX2-CTNND1H3BSU7 103 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 MAMSTRQ6ZN01 415 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 CALHM3Q86XJ0 350 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 HMX2A2RU54 273 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 FIGNL2A6NMB9 653 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 SEMA4FO95754 770 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 INHBBP09529 407 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 NDUFB7P17568 137 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 MOGAT1Q96PD6 335 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 GPR84Q9NQS5 396 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 FAM206AQ9NX38 181 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 ARSAP15289 507 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 SELEP16581 610 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 FGF8P55075 233 aaPredicted RBP13.82□□□□□ -0.2
COL5A1-201ENST00000371817 C1orf220Q5T0J3 134 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms