RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 OR52H1Q8NGJ2 320 aa25.34■■□□□ 1.65
SSBP3-204ENST00000371320 SLC39A7Q92504 469 aa25.34■■□□□ 1.65
SSBP3-204ENST00000371320 FBXW5Q969U6 566 aa25.34■■□□□ 1.65
SSBP3-204ENST00000371320 CYYR1Q96J86 154 aa25.34■■□□□ 1.65
SSBP3-204ENST00000371320 SGCEO43556 437 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 CXCL13O43927 109 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 ZNF250P15622 560 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 MPGP29372 298 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 NTF4P34130 210 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 RAB35Q15286 201 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 RSPO4Q2I0M5 234 aaPredicted RBP25.33■■□□□ 1.65
SSBP3-204ENST00000371320 SLC51BQ86UW2 128 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 GPR137CQ8N3F9 429 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 ARRDC1Q8N5I2 433 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 ROBO4Q8WZ75 1007 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 HAS2Q92819 552 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 PMS2P1A4D2B8 440 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 SERPINA7P05543 415 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 AVPR2P30518 371 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 STARP49675 285 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 TAS2R31P59538 309 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 OR10K1Q8NGX5 313 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 PIGTQ969N2 578 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 SGK3Q96BR1 496 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 TMA7Q9Y2S6 64 aaKnown RBP25.33■■□□□ 1.65
SSBP3-204ENST00000371320 PCDHGA1Q9Y5H4 931 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 ZDBF2Q9HCK1 2354 aa25.33■■□□□ 1.65
SSBP3-204ENST00000371320 ZNF716A6NP11 495 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 FAM25EA8MYX2 175 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 DUS4LO95620 317 aaKnown RBP25.32■■□□□ 1.64
SSBP3-204ENST00000371320 NMBP08949 121 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 SERPINA2P20848 420 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 LRRC37A5PQ49AS3 106 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 WIPI1Q5MNZ9 446 aaPredicted RBP25.32■■□□□ 1.64
SSBP3-204ENST00000371320 ZNF660Q6AZW8 331 aaPredicted RBP25.32■■□□□ 1.64
SSBP3-204ENST00000371320 C11orf87Q6NUJ2 197 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 AAED1Q7RTV5 226 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 STRADBQ9C0K7 418 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 P4HTMQ9NXG6 502 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 A0A0D9SG52 128 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 hCG_1807616A0A1W2PRN6 198 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 CST2P09228 141 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 SLC25A4P12235 298 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 AMY2BP19961 511 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 CRYGSP22914 178 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 BLVRBP30043 206 aaPredicted RBP25.32■■□□□ 1.64
SSBP3-204ENST00000371320 CYB561P49447 251 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 DRAM2Q6UX65 266 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 RFPL4BQ6ZWI9 263 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 KCTD9Q7L273 389 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 RAB11FIP2Q7L804 512 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 OR5H2Q8NGV7 314 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 OR2V1Q8NHB1 315 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 RBPMSQ93062 196 aaKnown RBP25.32■■□□□ 1.64
SSBP3-204ENST00000371320 ZPBPQ9BS86 351 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 ELL3Q9HB65 397 aaPredicted RBP25.32■■□□□ 1.64
SSBP3-204ENST00000371320 TMEM38BQ9NVV0 291 aa25.32■■□□□ 1.64
SSBP3-204ENST00000371320 SLC16A14Q7RTX9 510 aa25.31■■□□□ 1.64
SSBP3-204ENST00000371320 OR10D3Q8NH80 312 aa25.31■■□□□ 1.64
SSBP3-204ENST00000371320 LRRC20Q8TCA0 184 aa25.31■■□□□ 1.64
SSBP3-204ENST00000371320 CPT1CQ8TCG5 803 aa25.31■■□□□ 1.64
SSBP3-204ENST00000371320 PPP1R1CQ8WVI7 109 aa25.31■■□□□ 1.64
SSBP3-204ENST00000371320 ST6GALNAC5Q9BVH7 336 aa25.31■■□□□ 1.64
SSBP3-204ENST00000371320 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP25.31■■□□□ 1.644e-7■■■■■ 27
SSBP3-204ENST00000371320 DEPPQ9NTK1 212 aa25.31■■□□□ 1.64
SSBP3-204ENST00000371320 SYNGR3O43761 229 aa25.3■■□□□ 1.64
SSBP3-204ENST00000371320 SPDEFO95238 335 aa25.3■■□□□ 1.64
SSBP3-204ENST00000371320 ZNF774Q6NX45 483 aa25.3■■□□□ 1.64
SSBP3-204ENST00000371320 DBX2Q6ZNG2 339 aa25.3■■□□□ 1.64
SSBP3-204ENST00000371320 SEMA6DQ8NFY4 1073 aa25.3■■□□□ 1.64
SSBP3-204ENST00000371320 TAAR9Q96RI9 348 aa25.3■■□□□ 1.64
SSBP3-204ENST00000371320 KIAA1549Q9HCM3 1950 aa25.3■■□□□ 1.64
SSBP3-204ENST00000371320 CNTRLQ7Z7A1 2325 aa25.3■■□□□ 1.64
SSBP3-204ENST00000371320 POM121CA8CG34 1229 aa25.3■■□□□ 1.64
SSBP3-204ENST00000371320 FOXI3A8MTJ6 420 aaPredicted RBP25.3■■□□□ 1.64
SSBP3-204ENST00000371320 NPY4RP50391 375 aa25.3■■□□□ 1.64
SSBP3-204ENST00000371320 RGS7BPQ6MZT1 257 aaPredicted RBP25.3■■□□□ 1.64
SSBP3-204ENST00000371320 OR1F12Q8NHA8 337 aa25.3■■□□□ 1.64
SSBP3-204ENST00000371320 ADGRG7Q96K78 797 aa25.3■■□□□ 1.64
SSBP3-204ENST00000371320 CXorf58Q96LI9 332 aa25.3■■□□□ 1.64
SSBP3-204ENST00000371320 ALKBH3Q96Q83 286 aaPredicted RBP25.3■■□□□ 1.64
SSBP3-204ENST00000371320 TNFSF18Q9UNG2 199 aa25.3■■□□□ 1.64
SSBP3-204ENST00000371320 ZNF883P0CG24 379 aa25.29■■□□□ 1.64
SSBP3-204ENST00000371320 GDF1P27539 372 aa25.29■■□□□ 1.64
SSBP3-204ENST00000371320 PECRQ9BY49 303 aa25.29■■□□□ 1.64
SSBP3-204ENST00000371320 F10P00742 488 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 B4GALT1P15291 398 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 MPLP40238 635 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 ATP1B3P54709 279 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 SCRN3Q0VDG4 424 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 ZNF528Q3MIS6 628 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 ABLIM2Q6H8Q1 611 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 TMEM105Q8N8V8 129 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 OR2AE1Q8NHA4 323 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 WBP1Q96G27 269 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 TM2D1Q9BX74 207 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 ARRDC1-AS1Q9H2J1 176 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 GPR173Q9NS66 373 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 GPR132Q9UNW8 380 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 RTTNQ86VV8 2226 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms