RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 CDH26Q8IXH8 852 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 CMTM4Q8IZR5 234 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 NKAIN3Q8N8D7 197 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 SAMD12Q8N8I0 201 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 OR51D1Q8NGF3 324 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 OR56B2PQ8NGI1 322 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 ITFG2Q969R8 447 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 FAM3DQ96BQ1 224 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 CCDC120Q96HB5 630 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 C1orf147Q96MC9 270 aaPredicted RBP8.15□□□□□ -1.1
VTA1-201ENST00000367621 BBC3Q96PG8 261 aaPredicted RBP8.15□□□□□ -1.1
VTA1-201ENST00000367621 SPACA5Q96QH8 159 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 KCNK15Q9H427 330 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 METTL17Q9H7H0 456 aaPredicted RBP8.15□□□□□ -1.1
VTA1-201ENST00000367621 CNTD2Q9H8S5 307 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 PLGRKTQ9HBL7 147 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 CDH20Q9HBT6 801 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 HMG20AQ9NP66 347 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 GPR173Q9NS66 373 aa8.15□□□□□ -1.1
VTA1-201ENST00000367621 SMG1Q96Q15 3661 aaKnown RBP8.15□□□□□ -1.1
VTA1-201ENST00000367621 ARHGAP21Q5T5U3 1957 aa8.15□□□□□ -1.11
VTA1-201ENST00000367621 ZNF816-ZNF321PA0A0X1KG74 233 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 TMEM272A0A1B0GTI8 110 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 CD300LBA8K4G0 201 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 FAM229AH3BQW9 127 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 CST4P01036 141 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 APOA1P02647 267 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 NAT2P11245 290 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 HTR2CP28335 458 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 UQCRFS1P47985 274 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 ZNF83P51522 516 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 PPP5CP53041 499 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 PPP1CBP62140 327 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 NAAAQ02083 359 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 ZNF45Q02386 682 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 MALLQ13021 153 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 IGFBP7Q16270 282 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 MSMPQ1L6U9 139 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 C2orf76Q3KRA6 126 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 ALKBH6Q3KRA9 238 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 CLVS2Q5SYC1 327 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 SPATA46Q5T0L3 261 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 C20orf204Q6ZNR8 217 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 C1QL2Q7Z5L3 287 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 SNX29P2Q8IUI4 249 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 OR4M1Q8NGD0 313 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 OR6M1Q8NGM8 313 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 LILRB4Q8NHJ6 448 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 ZNF671Q8TAW3 534 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 SLC25A40Q8TBP6 338 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 BORCS5Q969J3 196 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 PIGTQ969N2 578 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 FOXRED1Q96CU9 486 aaPredicted RBP8.14□□□□□ -1.11
VTA1-201ENST00000367621 HAVCR1Q96D42 359 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 CMBLQ96DG6 245 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 MARS2Q96GW9 593 aaKnown RBP8.14□□□□□ -1.11
VTA1-201ENST00000367621 DIRAS2Q96HU8 199 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 CMTM3Q96MX0 182 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 UQCC2Q9BRT2 126 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 KRTAP9-9Q9BYP9 154 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 KRTAP9-4Q9BYQ2 154 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 WDR12Q9GZL7 423 aaKnown RBP8.14□□□□□ -1.11
VTA1-201ENST00000367621 SRRQ9GZT4 340 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 ABCG5Q9H222 651 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 OR51B6Q9H340 312 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 OPA3Q9H6K4 179 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 PLEKHA1Q9HB21 404 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 GPR160Q9UJ42 338 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 ETV7Q9Y603 341 aa8.14□□□□□ -1.11
VTA1-201ENST00000367621 INTS1Q8N201 2190 aaKnown RBP8.14□□□□□ -1.11
VTA1-201ENST00000367621 LOC100289279A0A1B0GTE1 492 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 FABP12A6NFH5 140 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 ZNF850A8MQ14 1090 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 M0R1B8 84 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 NRASP01111 189 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 ERCC1P07992 297 aaPredicted RBP8.13□□□□□ -1.11
VTA1-201ENST00000367621 AZGP1P25311 298 aaKnown RBP8.13□□□□□ -1.11
VTA1-201ENST00000367621 CD40LGP29965 261 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 CHRNB4P30926 498 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 ZNF93P35789 620 aaPredicted RBP8.13□□□□□ -1.11
VTA1-201ENST00000367621 MPV17P39210 176 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 OR3A4PP47883 348 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 POU3F4P49335 361 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 ASCL1P50553 236 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 MMP15P51511 669 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 SCAND1P57086 179 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 ZP1P60852 638 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 NKX6-1P78426 367 aaPredicted RBP8.13□□□□□ -1.11
VTA1-201ENST00000367621 PSG7Q13046 419 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 MADCAM1Q13477 382 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 DCTN2Q13561 401 aaKnown RBP8.13□□□□□ -1.11
VTA1-201ENST00000367621 RIN1Q13671 783 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 KISS1Q15726 138 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 UBE2NLQ5JXB2 153 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 SPANXN2Q5MJ10 180 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 OR2T2Q6IF00 324 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 OR10K2Q6IF99 312 aa8.13□□□□□ -1.11
VTA1-201ENST00000367621 METAP1DQ6UB28 335 aaPredicted RBP8.13□□□□□ -1.11
VTA1-201ENST00000367621 MRPL21Q7Z2W9 205 aaKnown RBP8.13□□□□□ -1.11
VTA1-201ENST00000367621 FJX1Q86VR8 437 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms