RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 ASCL5Q7RTU5 278 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 SHISA5Q8N114 240 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 CMTM2Q8TAZ6 248 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 APH1BQ8WW43 257 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 ZFP92A6NM28 416 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 HOXA11P31270 313 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-206ENST00000367253 PGGT1BP53609 377 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 BTG1P62324 171 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 MS4A2Q01362 244 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 OTUD1Q5VV17 481 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-206ENST00000367253 LINC00299Q6ZSB3 139 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 VRK2Q86Y07 508 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 SMIM20Q8N5G0 67 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 OR52N2Q8NGI0 321 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 SLC25A32Q9H2D1 315 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 TIMM10BQ9Y5J6 103 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 LOC102723971A0A1B0GUV8 181 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 ZNF724A8MTY0 619 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 ZIC2O95409 532 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-206ENST00000367253 RPL7P18124 248 aaKnown RBP7.81□□□□□ -1.16
SYNE1-206ENST00000367253 ARRB2P32121 409 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 BCL6P41182 706 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 HINT1P49773 126 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-206ENST00000367253 TPPP2P59282 170 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 ESPNLQ6ZVH7 1005 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 FCRLAQ7L513 359 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 RTN4RL2Q86UN3 420 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 LSRQ86X29 649 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-206ENST00000367253 SUMF1Q8NBK3 374 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 POC1AQ8NBT0 407 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 ZBTB34Q8NCN2 500 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 OR2Y1Q8NGV0 311 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 OR4A16Q8NH70 328 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 ADAMTS17Q8TE56 1095 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 TMEM230Q96A57 120 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 FIZ1Q96SL8 496 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 C11orf54Q9H0W9 315 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-206ENST00000367253 SF3B6Q9Y3B4 125 aaKnown RBP7.81□□□□□ -1.16
SYNE1-206ENST00000367253 MYH7BA7E2Y1 1941 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 LOC102723996A0A087X1L8 192 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 PGPEP1LA6NFU8 196 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 ZGLP1P0C6A0 271 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 SOX8P57073 446 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 ZNF90Q03938 601 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 ZNF385BQ569K4 471 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 GLIS1Q8NBF1 620 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 GPR26Q8NDV2 337 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 FAM71CQ8NEG0 241 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 OR9Q2Q8NGE9 314 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 OR5D14Q8NGL3 314 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 SVIPQ8NHG7 77 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 RNF125Q96EQ8 232 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 FAM71F1Q96KD3 344 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-206ENST00000367253 CHRNA10Q9GZZ6 450 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 HHLA2Q9UM44 414 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 MYH11P35749 1972 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 ARID1BQ8NFD5 2236 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-206ENST00000367253 GRPP07492 148 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 FBP1P09467 338 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 SURF2Q15527 256 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-206ENST00000367253 SMIM21Q3B7S5 101 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 HSD11B1LQ7Z5J1 315 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 ADGRG3Q86Y34 549 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 OR2G3Q8NGZ4 309 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 ANKRD9Q96BM1 317 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-206ENST00000367253 ZMYND19Q96E35 227 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-206ENST00000367253 TMEM19Q96HH6 336 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 PAAF1Q9BRP4 392 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 APOBEC3GQ9HC16 384 aaKnown RBP7.8□□□□□ -1.16
SYNE1-206ENST00000367253 ZFP64Q9NPA5 681 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 NRG2O14511 850 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-206ENST00000367253 SOCS6O14544 535 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 PMS2P2O95744 297 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 H2AFB1P0C5Y9 115 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 MPEG1Q2M385 716 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 UNC50Q53HI1 259 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 GRINAQ7Z429 371 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 CT55Q8WUE5 264 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 HARBI1Q96MB7 349 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 SGPP1Q9BX95 441 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 ISYNA1Q9NPH2 558 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 OR51B4Q9Y5P0 310 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 COL4A5P29400 1685 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 TRGV10A0A0A0MS01 117 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 C5orf67F2Z3F1 127 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 EREGO14944 169 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 PPP1R3DO95685 299 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 CD99P14209 185 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 P2RY4P51582 365 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 LY6DQ14210 128 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 MICBQ29980 383 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 CLLU1Q5K131 121 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 LAMTOR1Q6IAA8 161 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 MEPCEQ7L2J0 689 aaKnown RBP7.8□□□□□ -1.16
SYNE1-206ENST00000367253 LRRC56Q8IYG6 542 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-206ENST00000367253 SSC4DQ8WTU2 575 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 TMEM37Q8WXS4 190 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 RASL11BQ9BPW5 248 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 DCTN5Q9BTE1 182 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 NAA50Q9GZZ1 169 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms