RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 OR10A3P58181 314 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 RAB11AP62491 216 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 PRDX4Q13162 271 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 WDR38Q5JTN6 314 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 FAM27D1Q5T7N8 215 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 CELF2-AS1Q8N7Q2 184 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 OR8D4Q8NGM9 314 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 C17orf50Q8WW18 174 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 SLC7A6Q92536 515 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 TM4SF19Q96DZ7 209 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 SLA2Q9H6Q3 261 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 CES1P1Q9UKY3 287 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 LIPT2A6NK58 231 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 ASCL1P50553 236 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 AADACL4Q5VUY2 407 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 FAHD2BQ6P2I3 314 aaPredicted RBP10.32□□□□□ -0.76
SYNE1-204ENST00000367248 OSR2Q8N2R0 312 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 OR6X1Q8NH79 312 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 ABHD3Q8WU67 409 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 FRZBQ92765 325 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 FAHD2AQ96GK7 314 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 GLRX2Q9NS18 164 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 SDCBPO00560 298 aaPredicted RBP10.32□□□□□ -0.76
SYNE1-204ENST00000367248 M0QZ24 198 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 GPR37O15354 613 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 LY86O95711 162 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 OR51A4Q8NGJ6 313 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 RANGRFQ9HD47 186 aaPredicted RBP10.31□□□□□ -0.76
SYNE1-204ENST00000367248 TRGV10A0A0A0MS01 117 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 IGKV1-8A0A0C4DH67 115 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 F8W036 122 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 ADAM20O43506 726 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 OR8U8P0C7N1 319 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 PRF1P14222 555 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 S100A7P31151 101 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 OR3A4PP47883 348 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 EVX1P49640 407 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 GNG3P63215 75 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 ARHGEF39Q8N4T4 335 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 TMEM104Q8NE00 496 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 RAXQ9Y2V3 346 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 SEC16AO15027 2179 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 TRAV1-2A0A0B4J238 106 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 ACTL6AO96019 429 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 EPXP11678 715 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 MLF1P58340 268 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 RTL8BQ17RB0 113 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 RHOUQ7L0Q8 258 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 COMMD7Q86VX2 200 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 SCN4AP35499 1836 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 BTG1P62324 171 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 SKP2Q13309 424 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 ASAH1Q13510 395 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 OR10AD1Q8NGE0 317 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 CMBLQ96DG6 245 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 COPS3Q9UNS2 423 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 FOXJ3Q9UPW0 622 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 DTX4Q9Y2E6 619 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 FABP7O15540 132 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 NPBWR1P48145 328 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 MRPS34P82930 218 aaKnown RBP10.31□□□□□ -0.76
SYNE1-204ENST00000367248 STUMQ69YW2 141 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 BRICD5Q6PL45 260 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 RAB1CQ92928 201 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 DERL3Q96Q80 235 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 CHST6Q9GZX3 395 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 ICAM5Q9UMF0 924 aa10.31□□□□□ -0.76
SYNE1-204ENST00000367248 ZFPL1O95159 310 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 ADGRG3Q86Y34 549 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 OR2M7Q8NG81 312 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 CNTNAP3BQ96NU0 1288 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 GON7Q9BXV9 100 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 IL17BQ9UHF5 180 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 PCYT1BQ9Y5K3 369 aaPredicted RBP10.3□□□□□ -0.76
SYNE1-204ENST00000367248 RGPD4Q7Z3J3 1758 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 C17orf112F2Z3M2 114 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 ST8SIA3O43173 380 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 SP1P08047 785 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 RAB6AP20340 208 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 ZFP36L2P47974 494 aaKnown RBP10.3□□□□□ -0.76
SYNE1-204ENST00000367248 CDC20Q12834 499 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 HSD17B11Q8NBQ5 300 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 RPEQ96AT9 228 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 TDRD6O60522 2096 aaKnown RBP10.3□□□□□ -0.76
SYNE1-204ENST00000367248 TMPRSS2O15393 492 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 CLN5O75503 358 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 PRSS23O95084 383 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 RPS27AP62979 156 aaKnown RBP10.3□□□□□ -0.76
SYNE1-204ENST00000367248 UBA52P62987 128 aaKnown RBP10.3□□□□□ -0.76
SYNE1-204ENST00000367248 MN1Q10571 1320 aaPredicted RBP10.3□□□□□ -0.76
SYNE1-204ENST00000367248 TMEM200CA6NKL6 621 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 FGF9P31371 208 aaPredicted RBP10.3□□□□□ -0.76
SYNE1-204ENST00000367248 RFX2P48378 723 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 ZNF626Q68DY1 528 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 TSEN54Q7Z6J9 526 aaKnown RBP10.3□□□□□ -0.76
SYNE1-204ENST00000367248 DRAXINQ8NBI3 349 aaPredicted RBP10.3□□□□□ -0.76
SYNE1-204ENST00000367248 POC1BQ8TC44 478 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 FLVCR1Q9Y5Y0 555 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 A0A0B4J2A0 478 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 SIX6O95475 246 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms