RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CALCRP30988 508 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 TOR2AQ5JU69 321 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 ZNF547Q8IVP9 402 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 USB1Q9BQ65 265 aaKnown RBP10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 RRASP10301 218 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 ERHP84090 104 aaKnown RBP10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 LINC00303Q3SY05 128 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 C17orf47Q8NEP4 570 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 XKRY2A2RUG3 117 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 LRP3O75074 770 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 PTX4Q96A99 478 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 WDR89Q96FK6 387 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 CTAG2O75638 210 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 CSN1S1P47710 185 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 SLC25A35Q3KQZ1 300 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 SSX8Q7RTT4 187 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 CCL27Q9Y4X3 112 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 ZC3H12DA2A288 527 aaKnown RBP10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 WDR74Q6RFH5 385 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 SHANK1Q9Y566 2161 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 OR6C68A6NDL8 312 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 SULT1A3P0DMM9 295 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 SULT1A4P0DMN0 295 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 GNB3P16520 340 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 UBE2G2P60604 165 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 PRSS36Q5K4E3 855 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 SUMF1Q8NBK3 374 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 LHX4Q969G2 390 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 C5orf49A4QMS7 147 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 MAGEB4O15481 346 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 GALR2O43603 387 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 FBP1P09467 338 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 KIR2DS2P43631 304 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 HABP2Q14520 560 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 PRAMEF5Q5TYX0 476 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 PRAMEF6Q5VXH4 476 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 TMEM268Q5VZI3 342 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 GPR32P1Q8NGA4 272 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 NUDCD2Q8WVJ2 157 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 CFHR5Q9BXR6 569 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 GPR173Q9NS66 373 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 PCOLCE2Q9UKZ9 415 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 GABRG2P18507 467 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 CD80P33681 288 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 SMAD2Q15796 467 aaKnown RBP10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 CABLES2Q9BTV7 478 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 OR51I2Q9H344 312 aa10.81□□□□□ -0.68
CDC42BPA-203ENST00000366766 CRYAAP02489 173 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 DHRS2Q13268 280 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 ZNF707Q96C28 371 aaPredicted RBP10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 TSC2P49815 1807 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 OR5B21A6NL26 309 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 PYCARD-AS1I3L0S3 204 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 SLC2A1P11166 492 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 DEFA4P12838 97 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 LSM6P62312 80 aaKnown RBP10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 ETFBKMTQ8IXQ9 262 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 OR6X1Q8NH79 312 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 MARCH1Q8TCQ1 289 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 WSB2Q9NYS7 404 aaPredicted RBP10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 KIAA0141Q14154 515 aaPredicted RBP10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 EDEM2Q9BV94 578 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 GSG1Q2KHT4 349 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 LINC01555Q8NAE3 123 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 OR5AP2Q8NGF4 316 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 IL2RAP01589 272 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 HIST1H1DP16402 221 aaKnown RBP10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 NPBWR1P48145 328 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 GNG3P63215 75 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 OR13C5Q8NGS8 318 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 DOCK11Q5JSL3 2073 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 CCDC163A0A0D9SF12 145 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 OR6S1Q8NH40 331 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 NEIL1Q96FI4 390 aaPredicted RBP10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 MRPS18AQ9NVS2 196 aaKnown RBP10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 ZNF586Q9NXT0 402 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 HSD17B6O14756 317 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 IGFBP6P24592 240 aaPredicted RBP10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 EDDM3BP56851 147 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 CORO6Q6QEF8 472 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 KLK11Q9UBX7 282 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 PROCRQ9UNN8 238 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 CLN5O75503 358 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 GUSBP08236 651 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 C9orf135Q5VTT2 229 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 LINC00696Q6ZRV3 163 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 OR5M8Q8NGP6 311 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 ZNF727A8MUV8 499 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 UBE2G1P62253 170 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 OR51H1Q8NH63 302 aa10.8□□□□□ -0.68
CDC42BPA-203ENST00000366766 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 PATE1Q8WXA2 126 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 LTB4R2Q9NPC1 389 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 TMEM30CPA0ZSE6 113 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 PRRG2O14669 202 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 RRP8O43159 456 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 GFERP55789 205 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 IRF3Q14653 427 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 MENTQ9BUN1 341 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 VN1R1Q9GZP7 353 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms