RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 C3orf80F5H4A9 247 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 NPIPB9F8W1W9 429 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 MS4A18H0YCH9 400 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 H3BUI4 141 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 GABARAPH6UMI1 98 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 J3QRE1 110 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 L7N2F9 121 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 M0R233 179 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 M0R3H8 397 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 SULT1C2O00338 296 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 ZNF593O00488 134 aaPredicted RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 GABRPO00591 440 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 GPR171O14626 319 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 BET1O15155 118 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 CTDSPLO15194 276 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 SHOXO15266 292 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 XRCC3O43542 346 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 SPRY3O43610 288 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 CREBL2O60519 120 aaPredicted RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 ICMTO60725 284 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 LILRA1O75019 489 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 ZNF254O75437 659 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 SC5DO75845 299 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 NCR1O76036 304 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 SCGNO76038 276 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 OR7A10O76100 309 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 RGS11O94810 467 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 GLCEO94923 617 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 OR2A4O95047 310 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 GOSR1O95249 250 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 MPZL1O95297 269 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 PMS2P2O95744 297 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 CRYZL1O95825 349 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 GPANK1O95872 356 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 LALBAP00709 142 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 IGF2P01344 180 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 IGHA1P01876 353 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 HLA-DQA2P01906 255 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 HLA-DQB1P01920 261 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 CRYAAP02489 173 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 PRB2P02812 416 aaPredicted RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 RLN2P04090 185 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 RLN1P04808 185 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 CD2P06729 351 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 ANXA2P07355 339 aaKnown RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 ERCC1P07992 297 aaPredicted RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 NGFRP08138 427 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 CHRM2P08172 466 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 CSF1P09603 554 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 SBK2P0C263 348 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 ARSBP15848 533 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 CBR1P16152 277 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 SLC25A16P16260 332 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 ZNF823P16415 610 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 ZNF43P17038 809 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 MAKP20794 623 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 FUT4P22083 530 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 PRKACBP22694 351 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 PTAFRP25105 342 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 AZGP1P25311 298 aaKnown RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 ZFP36P26651 326 aaKnown RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 MPGP29372 298 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 CRABP1P29762 137 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 TGFBR1P36897 503 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 APOBEC1P41238 236 aaKnown RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 HTR2BP41595 481 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 ACAA2P42765 397 aaKnown RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 RAD52P43351 418 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 GPR4P46093 362 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 GPR6P46095 362 aaPredicted RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 TGM4P49221 684 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 GSK3AP49840 483 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 POLR2HP52434 150 aaKnown RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 NKX2-5P52952 324 aaPredicted RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 SLC25A1P53007 311 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 CRYBA2P53672 197 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 AP2S1P53680 142 aaPredicted RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 HCCSP53701 268 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 SUMO3P55854 103 aaPredicted RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 P2RX3P56373 397 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 CAV3P56539 151 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 SCAND1P57086 179 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 DSCR9P59020 149 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 RAP1BP61224 184 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 ERVS71-1P61550 626 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 SEC61A1P61619 476 aaKnown RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 SNRPD2P62316 118 aaKnown RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 RAB1AP62820 205 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 RAP1AP62834 184 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 ERVK-25P63136 954 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 EIF5AP63241 154 aaKnown RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 ACTG1P63261 375 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 CSNK2A1P68400 391 aaPredicted RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 SLC35A1P78382 337 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 CCL8P80075 99 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 LCN2P80188 198 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 HOXA4Q00056 320 aaPredicted RBP1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 DEFA6Q01524 100 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 IFITM2Q01629 132 aa1.32□□□□□ -2.2
RNU1-42P-201ENST00000364033 NAAAQ02083 359 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms