RNA–Protein interactions for RNA: ENST00000362773.1

RNU4-90P-201, Transcript of RNA, U4 small nuclear 90, pseudogene, humanhuman

BASIC

Gene RNU4-90P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-90P-201ENST00000362773 PRORYQ9H606 182 aa-0.12□□□□□ -2.43
RNU4-90P-201ENST00000362773 LRRC19Q9H756 370 aa-0.12□□□□□ -2.43
RNU4-90P-201ENST00000362773 RDH14Q9HBH5 336 aa-0.12□□□□□ -2.43
RNU4-90P-201ENST00000362773 TRAPPC1Q9Y5R8 145 aa-0.12□□□□□ -2.43
RNU4-90P-201ENST00000362773 NYNRINQ9P2P1 1898 aaKnown RBP-0.12□□□□□ -2.43
RNU4-90P-201ENST00000362773 SCAMP2O15127 329 aaKnown RBP-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 MAGEB3O15480 346 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 MYCNOSP40205 109 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 SLC1A2P43004 574 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 ERFP50548 548 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 TPMTP51580 245 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 ZNF121P58317 390 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 ENDOGQ14249 297 aaKnown RBP-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 HHATQ5VTY9 493 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 TMEM236Q5W0B7 351 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 KDM4DQ6B0I6 523 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 BPIFB6Q8NFQ5 453 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 OR10W1Q8NGF6 305 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 OR2V1Q8NHB1 315 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 LMX1AQ8TE12 382 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 TMEM38BQ9NVV0 291 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 SLC39A1Q9NY26 324 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 UXTQ9UBK9 157 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 SNX6Q9UNH7 406 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 FAT4Q6V0I7 4981 aa-0.13□□□□□ -2.43
RNU4-90P-201ENST00000362773 ARHGAP32A7KAX9 2087 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 IGKV1D-37A0A075B6S9 117 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 ERICH4A6NGS2 130 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 PCP4L1A6NKN8 68 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 GABRPO00591 440 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 ZNF189O75820 626 aaPredicted RBP-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 SEC11BP0C7V7 166 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 GZMBP10144 247 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 USF1P22415 310 aaPredicted RBP-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 TEAD1P28347 426 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 BLVRBP30043 206 aaPredicted RBP-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 PFN2P35080 140 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 UQCRFS1P47985 274 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 ACLYP53396 1101 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 DDX39BQ13838 428 aaKnown RBP-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 VPS26BQ4G0F5 336 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 CTSL3PQ5NE16 218 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 PPM1LQ5SGD2 360 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 TPTE2P1Q5T6R2 138 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 CYHR1Q6ZMK1 362 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 TRMT10CQ7L0Y3 403 aaKnown RBP-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 KIFAP3Q92845 792 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 APOBEC3DQ96AK3 386 aaPredicted RBP-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 DNAJC30Q96LL9 226 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 EMC6Q9BV81 110 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 LIN28AQ9H9Z2 209 aaKnown RBP-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 STARD10Q9Y365 291 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 CACNA1SQ13698 1873 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 MROH5Q6ZUA9 1318 aa-0.14□□□□□ -2.43
RNU4-90P-201ENST00000362773 PSPHP1O15172 72 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 PEX11AO75192 247 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 CRTAPO75718 401 aaPredicted RBP-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 HPRT1P00492 218 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 IGKV1D-33P01593 117 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 IGKV1-33P01594 117 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 ANXA5P08758 320 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 MCF2P10911 925 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 PBLDP30039 288 aaPredicted RBP-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 CD86P42081 329 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 PPICP45877 212 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 TUFMP49411 452 aaKnown RBP-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 EIF3EP60228 445 aaKnown RBP-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 RPS15AP62244 130 aaKnown RBP-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 BST2Q10589 180 aaKnown RBP-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 TMEM176BQ3YBM2 270 aaPredicted RBP-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 SLC25A24Q6NUK1 477 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 IQCKQ8N0W5 287 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 C2orf73Q8N5S3 287 aaPredicted RBP-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 OR2M7Q8NG81 312 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 FAM57AQ8TBR7 257 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 DCANP1Q8TF63 244 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 SFXN3Q9BWM7 321 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 TBL1XR1Q9BZK7 514 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 CCDC59Q9P031 241 aaKnown RBP-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 SLC7A11Q9UPY5 501 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 SLIT2O94813 1529 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 ELP1O95163 1332 aa-0.15□□□□□ -2.43
RNU4-90P-201ENST00000362773 USP47Q96K76 1375 aa-0.16□□□□□ -2.43
RNU4-90P-201ENST00000362773 A8MWP4 228 aa-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 CST1P01037 141 aa-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 MYL9P24844 172 aa-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 OR1E1P30953 314 aa-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 GNRHRP30968 328 aa-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 CEBPDP49716 269 aaPredicted RBP-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 CST6Q15828 149 aa-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 PSMD5Q16401 504 aa-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 CFAP157Q5JU67 520 aa-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 ZYG11AQ6WRX3 759 aa-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 CMTM1Q8IZ96 169 aa-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 HS3ST5Q8IZT8 346 aa-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 SPATA4Q8NEY3 305 aa-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 ISG20Q96AZ6 181 aaKnown RBP-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 TUBGCP3Q96CW5 907 aa-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 ECHDC3Q96DC8 303 aa-0.16□□□□□ -2.44
RNU4-90P-201ENST00000362773 SGTBQ96EQ0 304 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms