RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 IGKV2D-28P01615 120 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 IGLV3-25P01717 112 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 IGKV3-11P04433 115 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 SLC35G6P0C7Q6 338 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 BGNP21810 368 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 ME2P23368 584 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 MLF1P58340 268 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 RPL31P62899 125 aaKnown RBP2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 INCA1Q0VD86 236 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 TMED1Q13445 227 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 C6orf99Q4VX62 202 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 ABCA11PQ4W5N1 156 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 YIF1BQ5BJH7 314 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 FBXO48Q5FWF7 155 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 TEX30Q5JUR7 227 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 C6orf183Q5T699 404 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 LIN9Q5TKA1 542 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 AP1ARQ63HQ0 302 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 DUPD1Q68J44 220 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 APOBEC3HQ6NTF7 200 aaKnown RBP2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 GUSBP11Q6P575 273 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 SLC7A5P1Q8MH63 180 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 SYS1Q8N2H4 156 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 DRAM1Q8N682 238 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 OR6N2Q8NGY6 317 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 OR1L1Q8NH94 360 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 ENKURQ8TC29 256 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 DCAKDQ8WVC6 231 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 GHSRQ92847 366 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 CDS1Q92903 461 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 SLC25A46Q96AG3 418 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 L3HYPDHQ96EM0 354 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 MSANTD3Q96H12 275 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 RNF157Q96PX1 679 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 SYT4Q9H2B2 425 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 PLEKHF2Q9H8W4 249 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 ANKHQ9HCJ1 492 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 STMN3Q9NZ72 180 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 CFL2Q9Y281 166 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 STK38LQ9Y2H1 464 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 V9GYY9 64 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 BRCA1P38398 1863 aaKnown RBP2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 SLIT3O75094 1523 aa2.22□□□□□ -2.05
RNU6-28P-201ENST00000362378 CCL15-CCL14A0A0B4J2E2 113 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 CENPVL3A0A0U1RRI6 287 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 A0A1W2PNU3 283 aaPredicted RBP2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 LRCOL1A6NCL2 159 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 PSMD11O00231 422 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 PRMT5O14744 637 aaPredicted RBP2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 MYL12BO14950 172 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 PLIN3O60664 434 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 IGLV2-8P01709 118 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 PRB2P02812 416 aaPredicted RBP2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 RHOCP08134 193 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 OR5AL1P0C617 328 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZNF806P0C7X5 589 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 IL1RNP18510 177 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 ERFP50548 548 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 MTPNP58546 118 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 LINC00315P59091 139 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZNF816Q0VGE8 651 aaPredicted RBP2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 CDC20Q12834 499 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 CCL15Q16663 113 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 SLC25A35Q3KQZ1 300 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 FAM27D1Q5T7N8 215 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 H1FOOQ8IZA3 346 aaPredicted RBP2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 ST13P4Q8IZP2 240 aaPredicted RBP2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZNF645Q8N7E2 425 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 OR8K3Q8NH51 312 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 OR1S1Q8NH92 325 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZNF461Q8TAF7 563 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZFAND1Q8TCF1 268 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 DOK1Q99704 481 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 NAPGQ99747 312 aaPredicted RBP2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 TBL1YQ9BQ87 522 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 STMN4Q9H169 189 aaPredicted RBP2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 SIRT7Q9NRC8 400 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 ENOPH1Q9UHY7 261 aa2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 NDRG2Q9UN36 371 aaKnown RBP2.21□□□□□ -2.06
RNU6-28P-201ENST00000362378 ARID1AO14497 2285 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 TRAV8-4A0A0B4J246 113 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 LOC100506127A0A0U1RQW1 187 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 SEC14L6B5MCN3 397 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 M0R1X1 148 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZMPSTE24O75844 475 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 MPZL1O95297 269 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 P01737 135 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 CCNOP22674 350 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 NPY1RP25929 384 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 ARR3P36575 388 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 GALR1P47211 349 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 PRLHRP49683 370 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 HADHBP55084 474 aaKnown RBP2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 IFFO1Q0D2I5 559 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 TAL2Q16559 108 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 C18orf21Q32NC0 220 aaPredicted RBP2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 NDUFAF6Q330K2 333 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 Q3ZCU0 254 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 EPGNQ6UW88 154 aa2.2□□□□□ -2.06
RNU6-28P-201ENST00000362378 SHISA6Q6ZSJ9 500 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms