RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 DUX4L6P0CJ89 424 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 DUX4L7P0CJ90 424 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 CD79AP11912 226 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 PNLIPP16233 465 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 HLA-GP17693 338 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 GABRR1P24046 479 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 LAP3P28838 519 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 PDZK1IP1Q13113 114 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 SMAD4Q13485 552 aaKnown RBP9.31□□□□□ -0.92
SMC3-201ENST00000361804 CRIP3Q6Q6R5 217 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 TSTD1Q8NFU3 115 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 OR5H2Q8NGV7 314 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 ARL11Q969Q4 196 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 CNTNAP3BQ96NU0 1288 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 RHOFQ9HBH0 211 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 DUX4Q9UBX2 424 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 CA14Q9ULX7 337 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 OR5H15A6NDH6 313 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 F8VVB4 439 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 F8VWA3 439 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 TO15178 435 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 FOSL2P15408 326 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 P2RY4P51582 365 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 FLI1Q01543 452 aaPredicted RBP9.31□□□□□ -0.92
SMC3-201ENST00000361804 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.31□□□□□ -0.92
SMC3-201ENST00000361804 PHYHIPLQ96FC7 376 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 MSTNO14793 375 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 ANGPTL7O43827 346 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 C1QL1O75973 258 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 HPNP05981 417 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 QDPRP09417 244 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 OR8U9P0C7N5 309 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 BLVRBP30043 206 aaPredicted RBP9.31□□□□□ -0.92
SMC3-201ENST00000361804 PTGER4P35408 488 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 ZNF528Q3MIS6 628 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 DNM1P34Q6PK57 102 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 SLC25A45Q8N413 288 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 SLC30A7Q8NEW0 376 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 OR8U1Q8NH10 309 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 RNF141Q8WVD5 230 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 ISOC2Q96AB3 205 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 REEP6Q96HR9 211 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 LYZL4Q96KX0 146 aa9.31□□□□□ -0.92
SMC3-201ENST00000361804 A0A0A6YYH2 397 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 A6NIZ1 184 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 A6NJ64 397 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 VSTM2BA6NLU5 285 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 OR2J2O76002 312 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 SFT2D2O95562 160 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 OR3A2P47893 321 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 RAP1BP61224 184 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 DCAF7P61962 342 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 RAP1AP62834 184 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 CHAF1BQ13112 559 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 OR2AJ1Q8NGZ0 328 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 MFSD8Q8NHS3 518 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 CRB3Q9BUF7 120 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 LIME1Q9H400 295 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 FSCN3Q9NQT6 498 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 MCTS1Q9ULC4 181 aaKnown RBP9.3□□□□□ -0.92
SMC3-201ENST00000361804 LSM5Q9Y4Y9 91 aaKnown RBP9.3□□□□□ -0.92
SMC3-201ENST00000361804 DMXL2Q8TDJ6 3036 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 A0A1B0GX78 115 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 DHRS7CA6NNS2 312 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 SNAPC5O75971 98 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 SFTA3P0C7M3 94 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 SPINK2P20155 84 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 OPRM1P35372 400 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 PHYHD1Q5SRE7 291 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 TDHQ8IZJ6 230 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 ZNF837Q96EG3 531 aaPredicted RBP9.3□□□□□ -0.92
SMC3-201ENST00000361804 MRPL13Q9BYD1 178 aaKnown RBP9.3□□□□□ -0.92
SMC3-201ENST00000361804 ANKUB1A6NFN9 424 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 ZNF878C9JN71 531 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 K7ESF4 209 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 RPS2P15880 293 aaKnown RBP9.3□□□□□ -0.92
SMC3-201ENST00000361804 RAB13P51153 203 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 TMEM176BQ3YBM2 270 aaPredicted RBP9.3□□□□□ -0.92
SMC3-201ENST00000361804 RBMS3Q6XE24 437 aaKnown RBP9.3□□□□□ -0.92
SMC3-201ENST00000361804 CCDC36Q8IYA8 594 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 TMEM234Q8WY98 164 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 PTX4Q96A99 478 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 AKR1E2Q96JD6 320 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 NRIP2Q9BQI9 281 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 TMEM100Q9NV29 134 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 LPAR3Q9UBY5 353 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 PCDHGA1Q9Y5H4 931 aa9.3□□□□□ -0.92
SMC3-201ENST00000361804 RAB19A4D1S5 217 aa9.29□□□□□ -0.92
SMC3-201ENST00000361804 SLC33A1O00400 549 aaPredicted RBP9.29□□□□□ -0.92
SMC3-201ENST00000361804 XRCC2O43543 280 aa9.29□□□□□ -0.92
SMC3-201ENST00000361804 PGA4P0DJD7 388 aa9.29□□□□□ -0.92
SMC3-201ENST00000361804 PGA3P0DJD8 388 aa9.29□□□□□ -0.92
SMC3-201ENST00000361804 ADH6P28332 368 aa9.29□□□□□ -0.92
SMC3-201ENST00000361804 F2RL1P55085 397 aa9.29□□□□□ -0.92
SMC3-201ENST00000361804 GABREP78334 506 aa9.29□□□□□ -0.92
SMC3-201ENST00000361804 UBE2V2Q15819 145 aa9.29□□□□□ -0.92
SMC3-201ENST00000361804 OGFOD3Q6PK18 319 aa9.29□□□□□ -0.92
SMC3-201ENST00000361804 ZNF574Q6ZN55 896 aaPredicted RBP9.29□□□□□ -0.92
SMC3-201ENST00000361804 UEVLDQ8IX04 471 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms