RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 LILRA6Q6PI73 481 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 MOB1AQ9H8S9 216 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 SMAD7O15105 426 aaKnown RBP18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 AKR7A2O43488 359 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 CLDN23Q96B33 292 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 PAPPAQ13219 1627 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 ZNF724A8MTY0 619 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 MASP2O00187 686 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 HBE1P02100 147 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 TUSC5Q8IXB3 177 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 SMRP1Q8NCR6 262 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 SPACA1Q9HBV2 294 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 ATF1P18846 271 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 S100A4P26447 101 aaKnown RBP18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 TMEM174Q8WUU8 243 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 TTC9Q92623 222 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 GABRG3Q99928 467 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 TRPM6Q9BX84 2022 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 ACOT8O14734 319 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 SNAPINO95295 136 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 KCNRGQ8N5I3 272 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 KDF1Q8NAX2 398 aaPredicted RBP18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 GPBAR1Q8TDU6 330 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 BOLA1Q9Y3E2 137 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 UGT2A1Q9Y4X1 527 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 NAAAQ02083 359 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 ZNF628Q5EBL2 1059 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 CORO2AQ92828 525 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 TMEM231Q9H6L2 316 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 COA4Q9NYJ1 87 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 TRDV1A0A1B0GX56 115 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 C9orf172C9J069 976 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 AVPR2P30518 371 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 EXTL1Q92935 676 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 PELI1Q96FA3 418 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 ZFP64Q9NPA5 681 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 PRDM7Q9NQW5 492 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 CYR61O00622 381 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 TOMM34Q15785 309 aaPredicted RBP18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 DLL4Q9NR61 685 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 COX6B1P14854 86 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 AQP6Q13520 282 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 NKG7Q16617 165 aa18.16■□□□□ 0.5
CDC42BPB-201ENST00000361246 FUT6P51993 359 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 RAE1P78406 368 aaKnown RBP18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 MRGPRDQ8TDS7 321 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 EML2O95834 649 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 OR4S1Q8NGB4 309 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 MZB1Q8WU39 189 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 CYTIPO60759 359 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 PRICKLE4Q2TBC4 344 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 RHOXF1Q8NHV9 184 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 DLL1O00548 723 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 ECI1P42126 302 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 LIMK1P53667 647 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 SP6Q3SY56 376 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 STAC2Q6ZMT1 411 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 OR52B4Q8NGK2 314 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 RPUSD4Q96CM3 377 aaKnown RBP18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 CRISPLD2Q9H0B8 497 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 HIST2H3AQ71DI3 136 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 STRAPQ9Y3F4 350 aaKnown RBP18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 CTXN2P0C2S0 81 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 FAHD2BQ6P2I3 314 aaPredicted RBP18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 ZNF788Q6ZQV5 615 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 KCTD12Q96CX2 325 aaKnown RBP18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 FAHD2AQ96GK7 314 aa18.15■□□□□ 0.5
CDC42BPB-201ENST00000361246 NGFP01138 241 aa18.14■□□□□ 0.5
CDC42BPB-201ENST00000361246 TMEM41BQ5BJD5 291 aa18.14■□□□□ 0.5
CDC42BPB-201ENST00000361246 GOLT1BQ9Y3E0 138 aa18.14■□□□□ 0.5
CDC42BPB-201ENST00000361246 YIPF5Q969M3 257 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 C4orf45Q96LM5 186 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 A0A1B0GTH9 108 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 TMEM30CPA0ZSE6 113 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 CHRM2P08172 466 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 NTF3P20783 257 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 ZBTB25P24278 435 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 PKMYT1Q99640 499 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 PCGF1Q9BSM1 259 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 GGTLC2Q14390 218 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 AUNIPQ9H7T9 357 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 RNF224P0DH78 156 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 FABP5Q01469 135 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 ACVR1Q04771 509 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 HIKESHIQ53FT3 197 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 C11orf42Q8N5U0 333 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 POM121L2Q96KW2 1035 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 PCOLCE2Q9UKZ9 415 aa18.14■□□□□ 0.49
CDC42BPB-201ENST00000361246 PMS2P2O95744 297 aa18.13■□□□□ 0.49
CDC42BPB-201ENST00000361246 Q3ZCU0 254 aa18.13■□□□□ 0.49
CDC42BPB-201ENST00000361246 SLC25A22Q9H936 323 aa18.13■□□□□ 0.49
CDC42BPB-201ENST00000361246 ZNF331Q9NQX6 463 aaPredicted RBP18.13■□□□□ 0.49
CDC42BPB-201ENST00000361246 PTPRZ1P23471 2315 aaPredicted RBP18.13■□□□□ 0.49
CDC42BPB-201ENST00000361246 F5H697 171 aa18.13■□□□□ 0.49
CDC42BPB-201ENST00000361246 UBE3DQ7Z6J8 389 aa18.13■□□□□ 0.49
CDC42BPB-201ENST00000361246 SLC35B4Q969S0 331 aa18.13■□□□□ 0.49
CDC42BPB-201ENST00000361246 KNL1Q8NG31 2342 aa18.13■□□□□ 0.49
CDC42BPB-201ENST00000361246 H3F3AP84243 136 aa18.13■□□□□ 0.49
CDC42BPB-201ENST00000361246 TRBV5-4A0A0C4DH59 114 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms