RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 OPN4Q9UHM6 478 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 ZNF44P15621 663 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 EPHA1P21709 976 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 HNF4GQ14541 408 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 OR1S2Q8NGQ3 325 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 HPSE2Q8WWQ2 592 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 IL1F10Q8WWZ1 152 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 ZNF75AQ96N20 296 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 ALKBH3Q96Q83 286 aaPredicted RBP10.92□□□□□ -0.66
COL20A1-201ENST00000358894 SPACA1Q9HBV2 294 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 LANCL2Q9NS86 450 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 PADI1Q9ULC6 663 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 LOC102725191A0A1B0GVB3 256 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 OR2F2O95006 317 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 CNOT4O95628 575 aaKnown RBP10.91□□□□□ -0.66
COL20A1-201ENST00000358894 MGMTP16455 207 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 OMGP23515 440 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 RFC3P40938 356 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 SUMO3P55854 103 aaPredicted RBP10.91□□□□□ -0.66
COL20A1-201ENST00000358894 OR2F1Q13607 317 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 RHBDD2Q6NTF9 364 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 NAXDQ8IW45 347 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 D2HGDHQ8N465 521 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 BHLHE23Q8NDY6 225 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 OR4D6Q8NGJ1 314 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 TERB2Q8NHR7 220 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 FAM213BQ8TBF2 198 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 SEH1LQ96EE3 360 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 GPX7Q96SL4 187 aaPredicted RBP10.91□□□□□ -0.66
COL20A1-201ENST00000358894 MOB1AQ9H8S9 216 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.91□□□□□ -0.66
COL20A1-201ENST00000358894 LINC00696Q6ZRV3 163 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 ZNF695Q8IW36 515 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 ZNF230Q9UIE0 474 aaPredicted RBP10.91□□□□□ -0.66
COL20A1-201ENST00000358894 GPR179Q6PRD1 2367 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 A6NLC8 198 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 RFPL4AA6NLU0 287 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 RFPL4AL1F8VTS6 287 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 ADAM10O14672 748 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 CXCL13O43927 109 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 EFNA3P52797 238 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 PLA2G7Q13093 441 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 INPP5JQ15735 1006 aaPredicted RBP10.91□□□□□ -0.66
COL20A1-201ENST00000358894 HLA-BQ31612 363 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 SEMA6DQ8NFY4 1073 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 RGP1Q92546 391 aaPredicted RBP10.91□□□□□ -0.66
COL20A1-201ENST00000358894 ARHGAP5-AS1Q96IT6 56 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 MEGF10Q96KG7 1140 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 ZNF2Q9BSG1 426 aaPredicted RBP10.91□□□□□ -0.66
COL20A1-201ENST00000358894 ZNF426Q9BUY5 554 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 CALHM2Q9HA72 323 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 ZFP64Q9NPA5 681 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 SLC17A5Q9NRA2 495 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 A0A1W2PQD3 144 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 DHHO43323 396 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 VSIG10L2P0DP72 767 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 CPN1P15169 458 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 CATSPERDQ86XM0 798 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 MRPL41Q8IXM3 137 aaKnown RBP10.91□□□□□ -0.66
COL20A1-201ENST00000358894 MCHR2Q969V1 340 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 SGCZQ96LD1 299 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 C1orf123Q9NWV4 160 aa10.91□□□□□ -0.66
COL20A1-201ENST00000358894 GAR1Q9NY12 217 aaKnown RBP10.91□□□□□ -0.66
COL20A1-201ENST00000358894 MPDZO75970 2070 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 A0A0U1RQK1 487 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 NPIPB9F8W1W9 429 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 TNFSF11O14788 317 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 LYPD3O95274 346 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 IFNA2P01563 188 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 B4GALT1P15291 398 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 GALNSP34059 522 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 OR3A4PP47883 348 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 RPS11P62280 158 aaKnown RBP eCLIP10.9□□□□□ -0.66
COL20A1-201ENST00000358894 SSBP1Q04837 148 aaKnown RBP10.9□□□□□ -0.66
COL20A1-201ENST00000358894 CCDC71LQ8N9Z2 235 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 SECTM1Q8WVN6 248 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 ASB10Q8WXI3 467 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 ISOC2Q96AB3 205 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 MRPS18BQ9Y676 258 aaKnown RBP10.9□□□□□ -0.66
COL20A1-201ENST00000358894 BTBD17A6NE02 478 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 NME2P1O60361 137 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 SCAND1P57086 179 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 TMEM255AQ5JRV8 349 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 ATPAF1Q5TC12 328 aaPredicted RBP10.9□□□□□ -0.66
COL20A1-201ENST00000358894 DEGS2Q6QHC5 323 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 FBXW12Q6X9E4 464 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 TMPPEQ6ZT21 453 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 SUMF1Q8NBK3 374 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 LIN37Q96GY3 246 aaPredicted RBP10.9□□□□□ -0.66
COL20A1-201ENST00000358894 ZNF286AQ9HBT8 521 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 CRLF2Q9HC73 371 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 MMP24Q9Y5R2 645 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 MTCH2Q9Y6C9 303 aa10.9□□□□□ -0.66
COL20A1-201ENST00000358894 TCAPO15273 167 aa10.9□□□□□ -0.67
COL20A1-201ENST00000358894 LMX1BO60663 402 aa10.9□□□□□ -0.67
COL20A1-201ENST00000358894 ZNF728P0DKX0 622 aa10.9□□□□□ -0.67
COL20A1-201ENST00000358894 COTL1Q14019 142 aa10.9□□□□□ -0.67
COL20A1-201ENST00000358894 EXT1Q16394 746 aa10.9□□□□□ -0.67
COL20A1-201ENST00000358894 NCMAPQ5T1S8 102 aa10.9□□□□□ -0.67
COL20A1-201ENST00000358894 DCAF12Q5T6F0 453 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms