RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 ZDHHC23Q8IYP9 409 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 HIST1H2AAQ96QV6 131 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 IL4I1Q96RQ9 567 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 PKP2Q99959 881 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 PBOV1Q9GZY1 135 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 CTSZQ9UBR2 303 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 NUFIP1Q9UHK0 495 aaKnown RBP17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 COPS3Q9UNS2 423 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 ZNF670-ZNF695F2Z2N8 137 aa17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 M0R129 80 aa17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 PSMD9O00233 223 aa17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 CXCR4P61073 352 aa17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 HOXA4Q00056 320 aaPredicted RBP17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 POU4F2Q12837 409 aa17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 FAM76BQ5HYJ3 339 aa17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 ZBTB37Q5TC79 503 aa17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 ZFP1Q6P2D0 407 aa17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 BCDIN3DQ7Z5W3 292 aaKnown RBP17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 COMMD2Q86X83 199 aa17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 OR8J1Q8NGP2 316 aa17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 OR10Z1Q8NGY1 313 aa17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 PYDC1Q8WXC3 89 aa17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 PIGCQ92535 297 aa17.04■□□□□ 0.32
PPP1CA-202ENST00000358239 PRR32B1ATL7 298 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 SRRM5B3KS81 715 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 CDIPTO14735 213 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 MTRF1O75570 445 aaKnown RBP17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 ECDO95905 644 aaPredicted RBP17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 IGLV3-1P01715 115 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 GYPAP02724 150 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 EGR1P18146 543 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 CSNK2BP67870 215 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 TMED1Q13445 227 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 C9orf139Q6ZV77 190 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 PNLDC1Q8NA58 520 aaKnown RBP17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 C22orf15Q8WYQ4 148 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 RIBC2Q9H4K1 309 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 PPP1R3EQ9H7J1 279 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 GPR84Q9NQS5 396 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 ZNF69Q9UC07 566 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 ORC6Q9Y5N6 252 aa17.03■□□□□ 0.32
PPP1CA-202ENST00000358239 SAC3D1A6NKF1 404 aa17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 TMPRSS2O15393 492 aa17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 HTR1FP30939 366 aa17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 CDC42P60953 191 aa17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 RIPPLY1Q0D2K3 151 aa17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 KCTD8Q6ZWB6 473 aa17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 DOK3Q7L591 496 aa17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 SLC36A1Q7Z2H8 476 aa17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 THAP5Q7Z6K1 395 aa17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 RFKQ969G6 155 aa17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 RNF170Q96K19 258 aa17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 TTTY10Q9BZA0 68 aa17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 MS4A7Q9GZW8 240 aaPredicted RBP17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 DNTTIP1Q9H147 329 aa17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 ZMAT3Q9HA38 289 aaKnown RBP17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 R4GMQ9 66 aa17.02■□□□□ 0.32
PPP1CA-202ENST00000358239 OR5B21A6NL26 309 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 C22orf46C9J442 243 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 LOC110117498-PIK3R3F6TDL0 507 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 SRSF10O75494 262 aaKnown RBP17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 DHRS3O75911 302 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 PLATP00750 562 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 OR2T7P0C7T2 308 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 MTNR1AP48039 350 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 BPIFB3P59826 476 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 ACTG1P63261 375 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 CEACAM21Q3KPI0 293 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 BCL2L15Q5TBC7 163 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 SCCPDHQ8NBX0 429 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 OR51G2Q8NGK0 314 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 OR2T27Q8NH04 317 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 OR51E1Q8TCB6 317 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 TRUB1Q8WWH5 349 aaKnown RBP17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 HPSE2Q8WWQ2 592 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 SMURF1Q9HCE7 757 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 ENPP5Q9UJA9 477 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 SNX5Q9Y5X3 404 aa17.01■□□□□ 0.31
PPP1CA-202ENST00000358239 IGHV3OR15-7A0A075B7D8 119 aa17■□□□□ 0.31
PPP1CA-202ENST00000358239 TRAV40A0A0B4J280 105 aa17■□□□□ 0.31
PPP1CA-202ENST00000358239 ZNF879B4DU55 563 aa17■□□□□ 0.31
PPP1CA-202ENST00000358239 DVL1O14640 695 aa17■□□□□ 0.31
PPP1CA-202ENST00000358239 GPR37O15354 613 aa17■□□□□ 0.31
PPP1CA-202ENST00000358239 TTRP02766 147 aa17■□□□□ 0.31
PPP1CA-202ENST00000358239 ALPLP05186 524 aa17■□□□□ 0.31
PPP1CA-202ENST00000358239 KRT8P05787 483 aa17■□□□□ 0.31
PPP1CA-202ENST00000358239 IGHV4-38-2P0DP08 117 aa17■□□□□ 0.31
PPP1CA-202ENST00000358239 POLR2IP36954 125 aaKnown RBP17■□□□□ 0.31
PPP1CA-202ENST00000358239 FGF12P61328 243 aa17■□□□□ 0.31
PPP1CA-202ENST00000358239 GNG3P63215 75 aa17■□□□□ 0.31
PPP1CA-202ENST00000358239 MFGE8Q08431 387 aaPredicted RBP17■□□□□ 0.31
PPP1CA-202ENST00000358239 KPNB1Q14974 876 aaKnown RBP17■□□□□ 0.31
PPP1CA-202ENST00000358239 SIGLECL1Q8N7X8 197 aa17■□□□□ 0.31
PPP1CA-202ENST00000358239 ZDHHC22Q8N966 263 aa17■□□□□ 0.31
PPP1CA-202ENST00000358239 RPL3LQ92901 407 aaKnown RBP17■□□□□ 0.31
PPP1CA-202ENST00000358239 FAM71F1Q96KD3 344 aaPredicted RBP17■□□□□ 0.31
PPP1CA-202ENST00000358239 DMRTB1Q96MA1 342 aa17■□□□□ 0.31
PPP1CA-202ENST00000358239 ESM1Q9NQ30 184 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms