RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 CHST5Q9GZS9 411 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 DYNLRB1Q9NP97 96 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 CHD3Q12873 2000 aaKnown RBP21.59■■□□□ 1.05
SSBP3-202ENST00000357475 ABCA12Q86UK0 2595 aa21.59■■□□□ 1.05
SSBP3-202ENST00000357475 APCP25054 2843 aa21.59■■□□□ 1.05
SSBP3-202ENST00000357475 IGHV3-64DA0A0J9YX35 117 aa21.59■■□□□ 1.05
SSBP3-202ENST00000357475 LOC100506127A0A0U1RQW1 187 aa21.59■■□□□ 1.05
SSBP3-202ENST00000357475 A0A1B0GWJ7 208 aa21.59■■□□□ 1.05
SSBP3-202ENST00000357475 IGHV1-46P01743 117 aa21.59■■□□□ 1.05
SSBP3-202ENST00000357475 RBMXP38159 391 aaKnown RBP21.59■■□□□ 1.05
SSBP3-202ENST00000357475 SNRPD2P62316 118 aaKnown RBP21.59■■□□□ 1.05
SSBP3-202ENST00000357475 BLMHQ13867 455 aa21.59■■□□□ 1.05
SSBP3-202ENST00000357475 SLC16A12Q6ZSM3 486 aa21.59■■□□□ 1.05
SSBP3-202ENST00000357475 RNF144BQ7Z419 303 aa21.59■■□□□ 1.05
SSBP3-202ENST00000357475 SERPINA12Q8IW75 414 aa21.59■■□□□ 1.05
SSBP3-202ENST00000357475 IGFBPL1Q8WX77 278 aa21.59■■□□□ 1.05
SSBP3-202ENST00000357475 ITPKCQ96DU7 683 aa21.59■■□□□ 1.05
SSBP3-202ENST00000357475 TXNL4BQ9NX01 149 aaKnown RBP21.59■■□□□ 1.05
SSBP3-202ENST00000357475 SHISA3A0PJX4 238 aa21.58■■□□□ 1.04
SSBP3-202ENST00000357475 F5H5P2 479 aa21.58■■□□□ 1.04
SSBP3-202ENST00000357475 CD2P06729 351 aa21.58■■□□□ 1.04
SSBP3-202ENST00000357475 UCHL1P09936 223 aa21.58■■□□□ 1.04
SSBP3-202ENST00000357475 IGFBP3P17936 291 aaPredicted RBP21.58■■□□□ 1.04
SSBP3-202ENST00000357475 LSM3P62310 102 aaKnown RBP21.58■■□□□ 1.04
SSBP3-202ENST00000357475 PLCXD3Q63HM9 321 aa21.58■■□□□ 1.04
SSBP3-202ENST00000357475 ZDHHC23Q8IYP9 409 aa21.58■■□□□ 1.04
SSBP3-202ENST00000357475 OR13G1Q8NGZ3 307 aa21.58■■□□□ 1.04
SSBP3-202ENST00000357475 C10orf35Q96D05 121 aa21.58■■□□□ 1.04
SSBP3-202ENST00000357475 C17orf100A8MU93 164 aa21.57■■□□□ 1.04
SSBP3-202ENST00000357475 GATBO75879 557 aaKnown RBP21.57■■□□□ 1.04
SSBP3-202ENST00000357475 THBS2P35442 1172 aa21.57■■□□□ 1.04
SSBP3-202ENST00000357475 CDKN1AP38936 164 aa21.57■■□□□ 1.04
SSBP3-202ENST00000357475 OR8G1Q15617 311 aa21.57■■□□□ 1.04
SSBP3-202ENST00000357475 ZNF529Q6P280 563 aa21.57■■□□□ 1.04
SSBP3-202ENST00000357475 FTMTQ8N4E7 242 aa21.57■■□□□ 1.04
SSBP3-202ENST00000357475 TRMT10AQ8TBZ6 339 aaKnown RBP21.57■■□□□ 1.04
SSBP3-202ENST00000357475 PP6455Q8WZ26 134 aa21.57■■□□□ 1.04
SSBP3-202ENST00000357475 NKX3-1Q99801 234 aaPredicted RBP21.57■■□□□ 1.04
SSBP3-202ENST00000357475 CACNG6Q9BXT2 260 aa21.57■■□□□ 1.04
SSBP3-202ENST00000357475 ZCCHC4Q9H5U6 513 aa21.57■■□□□ 1.04
SSBP3-202ENST00000357475 CALRP27797 417 aaKnown RBP21.56■■□□□ 1.04
SSBP3-202ENST00000357475 MOGQ16653 247 aa21.56■■□□□ 1.04
SSBP3-202ENST00000357475 C20orf204Q6ZNR8 217 aa21.56■■□□□ 1.04
SSBP3-202ENST00000357475 UTS2BQ765I0 119 aa21.56■■□□□ 1.04
SSBP3-202ENST00000357475 WDR86Q86TI4 376 aa21.56■■□□□ 1.04
SSBP3-202ENST00000357475 OR5P3Q8WZ94 311 aa21.56■■□□□ 1.04
SSBP3-202ENST00000357475 ELMOD3Q96FG2 381 aa21.56■■□□□ 1.04
SSBP3-202ENST00000357475 CYSLTR2Q9NS75 346 aa21.56■■□□□ 1.04
SSBP3-202ENST00000357475 SSR3Q9UNL2 185 aa21.56■■□□□ 1.04
SSBP3-202ENST00000357475 MPC1Q9Y5U8 109 aa21.56■■□□□ 1.04
SSBP3-202ENST00000357475 SPG11Q96JI7 2443 aa21.56■■□□□ 1.04
SSBP3-202ENST00000357475 AIREO43918 545 aa21.55■■□□□ 1.04
SSBP3-202ENST00000357475 ATF1P18846 271 aa21.55■■□□□ 1.04
SSBP3-202ENST00000357475 MAPK3P27361 379 aaPredicted RBP21.55■■□□□ 1.04
SSBP3-202ENST00000357475 MAB21L1Q13394 359 aa21.55■■□□□ 1.04
SSBP3-202ENST00000357475 HSD17B12Q53GQ0 312 aa21.55■■□□□ 1.04
SSBP3-202ENST00000357475 OR1M1Q8NGA1 313 aa21.55■■□□□ 1.04
SSBP3-202ENST00000357475 OR5D14Q8NGL3 314 aa21.55■■□□□ 1.04
SSBP3-202ENST00000357475 ITFG2Q969R8 447 aa21.55■■□□□ 1.04
SSBP3-202ENST00000357475 SPACA5Q96QH8 159 aa21.55■■□□□ 1.04
SSBP3-202ENST00000357475 CGGBP1Q9UFW8 167 aaPredicted RBP21.55■■□□□ 1.04
SSBP3-202ENST00000357475 UNC79Q9P2D8 2635 aa21.55■■□□□ 1.04
SSBP3-202ENST00000357475 LOC100289279A0A1B0GTE1 492 aa21.55■■□□□ 1.04
SSBP3-202ENST00000357475 FSTP19883 344 aa21.55■■□□□ 1.04
SSBP3-202ENST00000357475 GALP22466 123 aa21.55■■□□□ 1.04
SSBP3-202ENST00000357475 FGF9P31371 208 aaPredicted RBP21.55■■□□□ 1.04
SSBP3-202ENST00000357475 CEACAM21Q3KPI0 293 aa21.55■■□□□ 1.04
SSBP3-202ENST00000357475 ANKRD13BQ86YJ7 626 aa21.55■■□□□ 1.04
SSBP3-202ENST00000357475 CLVS1Q8IUQ0 354 aaPredicted RBP21.55■■□□□ 1.04
SSBP3-202ENST00000357475 VRK1Q99986 396 aaPredicted RBP21.55■■□□□ 1.04
SSBP3-202ENST00000357475 USF3Q68DE3 2245 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 POLQO75417 2590 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 IGKV1-27A0A075B6S5 117 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 SULT1B1O43704 296 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 NCR1O76036 304 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 RAF1P04049 648 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 MAS1P04201 325 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 ADRA2CP18825 462 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 PPOXP50336 477 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 GPM6AP51674 278 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 CCL8P80075 99 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 CRIP3Q6Q6R5 217 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 DNAAF1Q8NEP3 725 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 OR8S1Q8NH09 359 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 SORCS2Q96PQ0 1159 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 CCL19Q99731 98 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 MS4A5Q9H3V2 200 aa21.54■■□□□ 1.04
SSBP3-202ENST00000357475 FAM230AA0A1W2PPH8 454 aa21.53■■□□□ 1.04
SSBP3-202ENST00000357475 SRMP19623 302 aa21.53■■□□□ 1.04
SSBP3-202ENST00000357475 AZGP1P25311 298 aaKnown RBP21.53■■□□□ 1.04
SSBP3-202ENST00000357475 CTF1Q16619 201 aa21.53■■□□□ 1.04
SSBP3-202ENST00000357475 PRAMEF6Q5VXH4 476 aa21.53■■□□□ 1.04
SSBP3-202ENST00000357475 LRRTM1Q86UE6 522 aa21.53■■□□□ 1.04
SSBP3-202ENST00000357475 OR52N4Q8NGI2 321 aa21.53■■□□□ 1.04
SSBP3-202ENST00000357475 ITLN1Q8WWA0 313 aa21.53■■□□□ 1.04
SSBP3-202ENST00000357475 RNF170Q96K19 258 aa21.53■■□□□ 1.04
SSBP3-202ENST00000357475 OR2V2Q96R30 315 aa21.53■■□□□ 1.04
SSBP3-202ENST00000357475 SLC22A4Q9H015 551 aa21.53■■□□□ 1.04
SSBP3-202ENST00000357475 ZDHHC8Q9ULC8 765 aa21.53■■□□□ 1.04
SSBP3-202ENST00000357475 BAHCC1Q9P281 2608 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms