RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 TMED7Q9Y3B3 224 aa11.18□□□□□ -0.62
RTFDC1-202ENST00000357348 CSAG2Q9Y5P2 127 aa11.18□□□□□ -0.62
RTFDC1-202ENST00000357348 ALPK2Q86TB3 2170 aa11.18□□□□□ -0.62
RTFDC1-202ENST00000357348 RAB27BO00194 218 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 ZNF208O43345 1280 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 NEURL1O76050 574 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 ISG15P05161 165 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 ABOP16442 354 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 CXCR1P25024 350 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 PSMB6P28072 239 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 SRSF3P84103 164 aaKnown RBP11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 OR1C1Q15619 314 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 SCGB2B2Q4G0G5 96 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 C1QL3Q5VWW1 255 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 LURAP1LQ8IV03 231 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 MISPQ8IVT2 679 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 FAM122AQ96E09 287 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 SLC25A44Q96H78 314 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 TLNRD1Q9H1K6 362 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 SDHAF3Q9NRP4 125 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 CGGBP1Q9UFW8 167 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 GDF2Q9UK05 429 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 PIEZO2Q9H5I5 2752 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 DSPP15924 2871 aaKnown RBP11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 PINLYPA6NC86 204 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 ANKUB1A6NFN9 424 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 PRSS44E7EML9 344 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 FOLR2P14207 255 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 TBPP20226 339 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 IL11P20809 199 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 CX3CR1P49238 355 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 ZNF41P51814 821 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 AKR1D1P51857 326 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 BLOC1S1P78537 153 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 IL13RA1P78552 427 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 PJVKQ0ZLH3 352 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 FOXF1Q12946 379 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 ATXN7L3Q14CW9 347 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 PLEKHN1Q494U1 663 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 KCTD18Q6PI47 426 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 OR2M3Q8NG83 312 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 OR4S1Q8NGB4 309 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 RNF138Q8WVD3 245 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 SGCZQ96LD1 299 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 NKX3-1Q99801 234 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 NUDT16L1Q9BRJ7 211 aaKnown RBP11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 ADAT1Q9BUB4 502 aaKnown RBP11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 RNF126Q9BV68 326 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 ANGPTL4Q9BY76 406 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 OR11A1Q9GZK7 315 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 ZNF552Q9H707 407 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 RNF122Q9H9V4 155 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 SH2D2AQ9NP31 389 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 ABI3Q9P2A4 366 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 RAB22AQ9UL26 194 aa11.17□□□□□ -0.62
RTFDC1-202ENST00000357348 MEX3AA1L020 520 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 PRSS37A4D1T9 235 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 TMEM235A6NFC5 223 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 H3BML4 177 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 PGAM2P15259 253 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 PAX6P26367 422 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 NPBWR1P48145 328 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 RIDAP52758 137 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 UNQ6126/PRO20091Q6UXV3 157 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 SLC35D2Q76EJ3 337 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 FJX1Q86VR8 437 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 NKAIN3Q8N8D7 197 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 BOLLQ8N9W6 283 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 OR51A2Q8NGJ7 313 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 CHMP1AQ9HD42 196 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 UQCC1Q9NVA1 299 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 ZMAT5Q9UDW3 170 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 CACNA1GO43497 2377 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 TMED7-TICAM2A0A0A6YYA0 188 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 IGHMP01871 453 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 RFPL3SP0C7P2 107 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 AKR1C2P52895 323 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 ADAM8P78325 824 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 ARG2P78540 354 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 QRFPP83859 136 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 AKR1C1Q04828 323 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 CDNFQ49AH0 187 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 AVPI1Q5T686 147 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 SPACA3Q8IXA5 215 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 SNIP1Q8TAD8 396 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 ZNF775Q96BV0 537 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 ANAPC10Q9UM13 185 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 HHLA2Q9UM44 414 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 LRP12Q9Y561 859 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 R4GMQ9 66 aa11.16□□□□□ -0.62
RTFDC1-202ENST00000357348 ZNF407Q9C0G0 2248 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 A0A0B4J2A0 478 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 CEACAM18A8MTB9 384 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 C11orf98E9PRG8 122 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 CRYBA1P05813 215 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 ERCC1P07992 297 aaPredicted RBP11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 GSK3AP49840 483 aa11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 RPL27P61353 136 aaKnown RBP11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 CYCSP99999 105 aaKnown RBP11.15□□□□□ -0.62
RTFDC1-202ENST00000357348 NKPD1Q17RQ9 610 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms