RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CCNL2Q96S94 520 aaPredicted RBP8.96□□□□□ -0.98
PTPRA-203ENST00000356147 SH3BGRL3Q9H299 93 aa8.96□□□□□ -0.98
PTPRA-203ENST00000356147 RAB18Q9NP72 206 aa8.96□□□□□ -0.98
PTPRA-203ENST00000356147 ASH2LQ9UBL3 628 aa8.96□□□□□ -0.98
PTPRA-203ENST00000356147 ZNF107Q9UII5 783 aaPredicted RBP8.96□□□□□ -0.98
PTPRA-203ENST00000356147 SDK2Q58EX2 2172 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 FRG2CA6NGY1 282 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 ATXN7O15265 892 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-203ENST00000356147 CLN5O75503 358 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 SEMA4FO95754 770 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 MT-ATP6P00846 226 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 HEXAP06865 529 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 NME1P15531 152 aaKnown RBP8.95□□□□□ -0.98
PTPRA-203ENST00000356147 BLVRBP30043 206 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-203ENST00000356147 CTHP32929 405 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 S100A12P80511 92 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 HSF1Q00613 529 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 BRICD5Q6PL45 260 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 NUP54Q7Z3B4 507 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 HSD17B11Q8NBQ5 300 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 RNF133Q8WVZ7 376 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 TOMM40LQ969M1 308 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 MRPL24Q96A35 216 aaKnown RBP8.95□□□□□ -0.98
PTPRA-203ENST00000356147 SUSD2Q9UGT4 822 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 YIF1AO95070 293 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 LY86O95711 162 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 PRH1P02810 166 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 IGKV3-11P04433 115 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 IFI6P09912 130 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 GIMD1P0DJR0 217 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 FBXW4P57775 412 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 ZNF121P58317 390 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-203ENST00000356147 THADAQ6YHU6 1953 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 DTX1Q86Y01 620 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 FAM131CQ96AQ9 280 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 C1orf147Q96MC9 270 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-203ENST00000356147 LRRC61Q9BV99 259 aa8.95□□□□□ -0.98
PTPRA-203ENST00000356147 A0A1W2PNR3 127 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 FAM221AA4D161 298 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 ALG1L2C9J202 215 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 FAM157AC9JC47 383 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 EIF1BO60739 113 aaKnown RBP8.94□□□□□ -0.98
PTPRA-203ENST00000356147 IGHV4-34P06331 123 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 HOXC4P09017 264 aaPredicted RBP8.94□□□□□ -0.98
PTPRA-203ENST00000356147 OR8U8P0C7N1 319 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 RPS2P15880 293 aaKnown RBP8.94□□□□□ -0.98
PTPRA-203ENST00000356147 GABRR1P24046 479 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 EIF1P41567 113 aaKnown RBP8.94□□□□□ -0.98
PTPRA-203ENST00000356147 TNFRSF4P43489 277 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 SULT1A2P50226 295 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 MMP16P51512 607 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 NOVA1P51513 510 aaKnown RBP8.94□□□□□ -0.98
PTPRA-203ENST00000356147 RRADP55042 308 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 GRINAQ7Z429 371 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 C6orf201Q7Z4U5 140 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 SKA3Q8IX90 412 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 C20orf196Q8IYI0 205 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 OR8B12Q8NGG6 310 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 DAZLQ92904 295 aaKnown RBP8.94□□□□□ -0.98
PTPRA-203ENST00000356147 PTX4Q96A99 478 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 WDR77Q9BQA1 342 aaPredicted RBP8.94□□□□□ -0.98
PTPRA-203ENST00000356147 ZNF251Q9BRH9 671 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 CFHR5Q9BXR6 569 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 WWTR1Q9GZV5 400 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 PUS1Q9Y606 427 aaKnown RBP eCLIP8.94□□□□□ -0.98
PTPRA-203ENST00000356147 SHANK1Q9Y566 2161 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 IGKV1-9A0A0C4DH69 117 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 TSPAN2O60636 221 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 CD37P11049 281 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 HOXB1P14653 301 aaPredicted RBP8.94□□□□□ -0.98
PTPRA-203ENST00000356147 SLC6A9P48067 706 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 GSK3AP49840 483 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 DVL1P1P54792 670 aaPredicted RBP8.94□□□□□ -0.98
PTPRA-203ENST00000356147 DYRK2Q92630 601 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 SAT2Q96F10 170 aaPredicted RBP8.94□□□□□ -0.98
PTPRA-203ENST00000356147 KCNK17Q96T54 332 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 CUTCQ9NTM9 273 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 TINAGQ9UJW2 476 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 MMP24Q9Y5R2 645 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 DHRS7CA6NNS2 312 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 FTCDNL1E5RQL4 147 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 STMND1H3BQB6 276 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 MFNGO00587 321 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 ADAM10O14672 748 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 ZNF17P17021 662 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 GABRG2P18507 467 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 FPR2P25090 351 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 OPRM1P35372 400 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 RBMXP38159 391 aaKnown RBP8.94□□□□□ -0.98
PTPRA-203ENST00000356147 FXYD4P59646 89 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 PCK2Q16822 640 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 CHRFAM7AQ494W8 412 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 PDZD11Q5EBL8 140 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 BATF2Q8N1L9 274 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 OR9K2Q8NGE7 335 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 PIGTQ969N2 578 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 TCTN2Q96GX1 697 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 CNTNAP3Q9BZ76 1288 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 OBP2AQ9NY56 170 aa8.94□□□□□ -0.98
PTPRA-203ENST00000356147 LHFPL6Q9Y693 200 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms