RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ITGB4P16144 1822 aa11.85□□□□□ -0.51
SCN8A-202ENST00000355133 KIAA0100Q14667 2235 aaKnown RBP11.84□□□□□ -0.51
SCN8A-202ENST00000355133 M0R1X1 148 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 RER1O15258 196 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 PDZK1IP1Q13113 114 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 TRIP6Q15654 476 aaKnown RBP11.84□□□□□ -0.51
SCN8A-202ENST00000355133 CLEC12BQ2HXU8 276 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 SLC38A6Q8IZM9 456 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 FAM122AQ96E09 287 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 PLEKHA2Q9HB19 425 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 LINC01387J3KSC0 135 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 SLC25A4P12235 298 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 TPBGQ13641 420 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 ARHGEF39Q8N4T4 335 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 CA5BP1Q8WTZ4 195 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 ZNRF4Q8WWF5 429 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 SLC25A32Q9H2D1 315 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 FBXO8Q9NRD0 319 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF629Q9UEG4 869 aaPredicted RBP11.84□□□□□ -0.51
SCN8A-202ENST00000355133 FOXJ3Q9UPW0 622 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 IL9P15248 144 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF774Q6NX45 483 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 SFTPA1Q8IWL2 248 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 GSX2Q9BZM3 304 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 CCL2P13500 99 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 RNPS1Q15287 305 aaKnown RBP11.84□□□□□ -0.51
SCN8A-202ENST00000355133 NKG7Q16617 165 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 GPBAR1Q8TDU6 330 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 PPIHO43447 177 aaKnown RBP11.84□□□□□ -0.51
SCN8A-202ENST00000355133 SSPNQ14714 243 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 MICBQ29980 383 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 PRICKLE4Q2TBC4 344 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 PLA1AQ53H76 456 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 C2CD4CQ8TF44 421 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 PP6455Q8WZ26 134 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 CLDN23Q96B33 292 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF707Q96C28 371 aaPredicted RBP11.84□□□□□ -0.51
SCN8A-202ENST00000355133 DNAJB12Q9NXW2 375 aaKnown RBP11.84□□□□□ -0.51
SCN8A-202ENST00000355133 MTCH2Q9Y6C9 303 aa11.84□□□□□ -0.51
SCN8A-202ENST00000355133 SH2D7A6NKC9 451 aaPredicted RBP11.83□□□□□ -0.52
SCN8A-202ENST00000355133 LYZL6O75951 148 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 CLDN20P56880 219 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 FAM109BQ6ICB4 259 aaPredicted RBP11.83□□□□□ -0.52
SCN8A-202ENST00000355133 CMBLQ96DG6 245 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 TRAPPC2P0DI81 140 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 TRAPPC2BP0DI82 140 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 FUT3P21217 361 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 EPHA8P29322 1005 aaPredicted RBP11.83□□□□□ -0.52
SCN8A-202ENST00000355133 HES3Q5TGS1 186 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 DTWD2Q8NBA8 298 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 OR5AP2Q8NGF4 316 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 ZNF230Q9UIE0 474 aaPredicted RBP11.83□□□□□ -0.52
SCN8A-202ENST00000355133 SIGLEC7Q9Y286 467 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 TRPM3Q9HCF6 1732 aaPredicted RBP11.83□□□□□ -0.52
SCN8A-202ENST00000355133 CNTRLQ7Z7A1 2325 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 TRAV1-2A0A0B4J238 106 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 CXorf51AA0A1B0GTR3 108 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 UBE2L5PA0A1B0GUS4 154 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 MBP02144 154 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 FCER1GP30273 86 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 GNG3P63215 75 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 CALHM3Q86XJ0 350 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 GPR32P1Q8NGA4 272 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 OR13D1Q8NGV5 346 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 OR10D3Q8NH80 312 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 OR2T6Q8NHC8 308 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 LRFN3Q9BTN0 628 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 RYDENQ9NUL5 291 aaKnown RBP11.83□□□□□ -0.52
SCN8A-202ENST00000355133 LAMP3Q9UQV4 416 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 ASPDHA6ND91 283 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 SERPINE3A8MV23 424 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 POU2F2P09086 479 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 AKR1C3P42330 323 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 NXPH1P58417 271 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 OXA1LQ15070 435 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 BAK1Q16611 211 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 PNLIPRP3Q17RR3 467 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 BTLAQ7Z6A9 289 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 CCL17Q92583 94 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 POM121L2Q96KW2 1035 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 FBXO34Q9NWN3 711 aa11.83□□□□□ -0.52
SCN8A-202ENST00000355133 A0A1B0GUH1 482 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 SLC17A2O00624 439 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 TOX4O94842 621 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 KRASP01116 189 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 RBP4P02753 201 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 WDR38Q5JTN6 314 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 PWWP2BQ6NUJ5 590 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 ZNF785A8K8V0 405 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 SOX15O60248 233 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 CEACAM6P40199 344 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 HTRA4P83105 476 aaPredicted RBP11.82□□□□□ -0.52
SCN8A-202ENST00000355133 LINC00303Q3SY05 128 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 Q7L0L9 218 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 SLC36A1Q7Z2H8 476 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 RFESDQ8TAC1 157 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 PPP1R1CQ8WVI7 109 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 MCHR2Q969V1 340 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 ADGRG7Q96K78 797 aa11.82□□□□□ -0.52
SCN8A-202ENST00000355133 OR2A5Q96R48 311 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms