RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 KLRF1Q9NZS2 232 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 KLK13Q9UKR3 277 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 PPP1R2P9O14990 202 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 IFNA17P01571 189 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 SFTPBP07988 381 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 OR8U9P0C7N5 309 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 ITPKBP27987 946 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 LPAR6P43657 344 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 SULT1A1P50225 295 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 FHL1Q13642 323 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 EIF2B1Q14232 305 aaKnown RBP8.94□□□□□ -0.98
SYNE1-203ENST00000354674 ZNF585AQ6P3V2 769 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 DEGS2Q6QHC5 323 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 C5orf24Q7Z6I8 188 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 C17orf78Q8N4C9 275 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 ACBD7Q8N6N7 88 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 OR10AD1Q8NGE0 317 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 OR8U1Q8NH10 309 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 MITD1Q8WV92 249 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 LIPHQ8WWY8 451 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 ST8SIA1Q92185 356 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 BPIFA2Q96DR5 249 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 RNF122Q9H9V4 155 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 FGF20Q9NP95 211 aaPredicted RBP8.94□□□□□ -0.98
SYNE1-203ENST00000354674 A0A0D9SG52 128 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 HEXAP06865 529 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 CCL3P10147 92 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 WT1P19544 449 aaPredicted RBP8.94□□□□□ -0.98
SYNE1-203ENST00000354674 TACR3P29371 465 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 CCR4P51679 360 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 EGR4Q05215 589 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 Q5PR19 223 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 NIPAL3Q6P499 406 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 VASH2Q86V25 355 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 TMEM156Q8N614 296 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 OR2M3Q8NG83 312 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 OR5AP2Q8NGF4 316 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 OSTF1Q92882 214 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 KIRREL1Q96J84 757 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 TEAD3Q99594 435 aa8.94□□□□□ -0.98
SYNE1-203ENST00000354674 DCHS1Q96JQ0 3298 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 C2orf72A6NCS6 295 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 WISP1O95388 367 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 PPP1R3DO95685 299 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 GP1BBP13224 206 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 PAX6P26367 422 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 IL2RGP31785 369 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 NAA10P41227 235 aaPredicted RBP8.93□□□□□ -0.98
SYNE1-203ENST00000354674 FXYD6P3P58550 94 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 EFNB1P98172 346 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 EGR3Q06889 387 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 SRSF6Q13247 344 aaKnown RBP8.93□□□□□ -0.98
SYNE1-203ENST00000354674 AADACL4Q5VUY2 407 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 C11orf87Q6NUJ2 197 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 ZNF620Q6ZNG0 422 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 SLC36A1Q7Z2H8 476 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 GRINAQ7Z429 371 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 S100A7AQ86SG5 101 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 ZNF563Q8TA94 476 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 RNASE8Q8TDE3 154 aaKnown RBP8.93□□□□□ -0.98
SYNE1-203ENST00000354674 SAMD8Q96LT4 415 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 C5orf34Q96MH7 638 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 INTS14Q96SY0 518 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 ZNF649Q9BS31 505 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 TRIM36Q9NQ86 728 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 FBXO7Q9Y3I1 522 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 UNC119BA6NIH7 251 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 ELOA3DA6NLF2 546 aaPredicted RBP8.93□□□□□ -0.98
SYNE1-203ENST00000354674 IMPA2O14732 288 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 ZNF208O43345 1280 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 NPIPB7O75200 414 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 ZNF432O94892 652 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 OR2C1O95371 312 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 TRGC2P03986 189 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 FOLR2P14207 255 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 POLR2HP52434 150 aaKnown RBP8.93□□□□□ -0.98
SYNE1-203ENST00000354674 ELOA3BQ3SY89 546 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 ATP1A1-AS1Q5TC04 95 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 CD163Q86VB7 1156 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 CLEC1AQ8NC01 280 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 ELOA3Q8NG57 546 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 RNF141Q8WVD5 230 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 ASB6Q9NWX5 421 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 SSUH2Q9Y2M2 353 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 PPIAL4AQ9Y536 164 aa8.93□□□□□ -0.98
SYNE1-203ENST00000354674 GEMIN2O14893 280 aaKnown RBP8.92□□□□□ -0.98
SYNE1-203ENST00000354674 NME2P1O60361 137 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 IFNA10P01566 189 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 OR8G3PP0DMU2 310 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 RRADP55042 308 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 ZNF616Q08AN1 781 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 THEM4Q5T1C6 240 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 OR2T2Q6IF00 324 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 TMEM234Q8WY98 164 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 FGF11Q92914 225 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 SNX22Q96L94 193 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 PACRGQ96M98 296 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-203ENST00000354674 DPH1Q9BZG8 443 aa8.92□□□□□ -0.98
SYNE1-203ENST00000354674 MED17Q9NVC6 651 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms