RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PNLIPP16233 465 aa17.19■□□□□ 0.34
COL13A1-201ENST00000354547 S100A10P60903 97 aa17.19■□□□□ 0.34
COL13A1-201ENST00000354547 ZSCAN4Q8NAM6 433 aaPredicted RBP17.19■□□□□ 0.34
COL13A1-201ENST00000354547 RNF138Q8WVD3 245 aa17.19■□□□□ 0.34
COL13A1-201ENST00000354547 HDHD3Q9BSH5 251 aaPredicted RBP17.19■□□□□ 0.34
COL13A1-201ENST00000354547 PLEK2Q9NYT0 353 aa17.19■□□□□ 0.34
COL13A1-201ENST00000354547 URB1O60287 2271 aaKnown RBP17.18■□□□□ 0.34
COL13A1-201ENST00000354547 MPZP25189 248 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 STARD6P59095 220 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 FAHD2BQ6P2I3 314 aaPredicted RBP17.18■□□□□ 0.34
COL13A1-201ENST00000354547 C6orf201Q7Z4U5 140 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 OR52H1Q8NGJ2 320 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 OR2AE1Q8NHA4 323 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 FAHD2AQ96GK7 314 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 SHDQ96IW2 340 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 OR10C1Q96KK4 312 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 FAM117AQ9C073 453 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 MFNGO00587 321 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 CFIP05156 583 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 SFTPBP07988 381 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 MSR1P21757 451 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 TAS2R31P59538 309 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 LYSMD4Q5XG99 296 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 TMEM17Q86X19 198 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 EIF4E3Q8N5X7 224 aaKnown RBP17.18■□□□□ 0.34
COL13A1-201ENST00000354547 OR51F2Q8NH61 342 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 CDC6Q99741 560 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 ADAT1Q9BUB4 502 aaKnown RBP17.18■□□□□ 0.34
COL13A1-201ENST00000354547 TMEM231Q9H6L2 316 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 HDGFL3Q9Y3E1 203 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 FLVCR1Q9Y5Y0 555 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 IGLV3-32A0A0A0MS00 114 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 TBPP20226 339 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 GSK3AP49840 483 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 GRB2P62993 217 aaKnown RBP17.18■□□□□ 0.34
COL13A1-201ENST00000354547 SUPT4H1P63272 117 aaKnown RBP17.18■□□□□ 0.34
COL13A1-201ENST00000354547 AIMP2Q13155 320 aaKnown RBP17.18■□□□□ 0.34
COL13A1-201ENST00000354547 HLA-BQ31612 363 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 PIK3IP1Q96FE7 263 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 RTBDNQ9BSG5 229 aaPredicted RBP17.18■□□□□ 0.34
COL13A1-201ENST00000354547 SLC39A1Q9NY26 324 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 PISDQ9UG56 409 aa17.18■□□□□ 0.34
COL13A1-201ENST00000354547 DBX1A6NMT0 343 aa17.17■□□□□ 0.34
COL13A1-201ENST00000354547 ANGPTL7O43827 346 aa17.17■□□□□ 0.34
COL13A1-201ENST00000354547 HPNP05981 417 aa17.17■□□□□ 0.34
COL13A1-201ENST00000354547 FBLN5Q9UBX5 448 aa17.17■□□□□ 0.34
COL13A1-201ENST00000354547 TNFSF11O14788 317 aa17.17■□□□□ 0.34
COL13A1-201ENST00000354547 PATE4P0C8F1 98 aa17.17■□□□□ 0.34
COL13A1-201ENST00000354547 EIF1P41567 113 aaKnown RBP17.17■□□□□ 0.34
COL13A1-201ENST00000354547 HIST3H3Q16695 136 aa17.17■□□□□ 0.34
COL13A1-201ENST00000354547 CHRFAM7AQ494W8 412 aa17.17■□□□□ 0.34
COL13A1-201ENST00000354547 DRAM2Q6UX65 266 aa17.17■□□□□ 0.34
COL13A1-201ENST00000354547 TMEM156Q8N614 296 aa17.17■□□□□ 0.34
COL13A1-201ENST00000354547 SLC25A43Q8WUT9 341 aaPredicted RBP17.17■□□□□ 0.34
COL13A1-201ENST00000354547 MARC2Q969Z3 335 aa17.17■□□□□ 0.34
COL13A1-201ENST00000354547 GPR173Q9NS66 373 aa17.17■□□□□ 0.34
COL13A1-201ENST00000354547 IGKV1D-8A0A087WSZ0 117 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 BET1O15155 118 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 SFT2D2O95562 160 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 PCOLCEQ15113 449 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.16■□□□□ 0.34
COL13A1-201ENST00000354547 ARRDC1Q8N5I2 433 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 GJC3Q8NFK1 279 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 DUSP23Q9BVJ7 150 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 GLS2Q9UI32 602 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 DKKL1Q9UK85 242 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 TSPAN9O75954 239 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 CCL4P13236 92 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 RAB32Q13637 225 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 ZNF585AQ6P3V2 769 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 FADS6Q8N9I5 356 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 ADPRHL1Q8NDY3 354 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 ZNF581Q9P0T4 197 aa17.16■□□□□ 0.34
COL13A1-201ENST00000354547 GPR31O00270 319 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 TMEM225BP0DP42 221 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 SRSF3P84103 164 aaKnown RBP17.15■□□□□ 0.34
COL13A1-201ENST00000354547 ECH1Q13011 328 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 ENDOGQ14249 297 aaKnown RBP17.15■□□□□ 0.34
COL13A1-201ENST00000354547 SNAI3Q3KNW1 292 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 VAX1Q5SQQ9 334 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 AADACL3Q5VUY0 350 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 TMEM88Q6PEY1 159 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 BRICD5Q6PL45 260 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 SAP25Q8TEE9 199 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 OCSTAMPQ9BR26 566 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 PECRQ9BY49 303 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 NELFAQ9H3P2 528 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 RSPO1Q2MKA7 263 aaPredicted RBP17.15■□□□□ 0.34
COL13A1-201ENST00000354547 MRPL14Q6P1L8 145 aaKnown RBP17.15■□□□□ 0.34
COL13A1-201ENST00000354547 B3GALT1Q9Y5Z6 326 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 FAM230AA0A1W2PPH8 454 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 M0R135 149 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 SPRY1O43609 319 aaPredicted RBP17.15■□□□□ 0.34
COL13A1-201ENST00000354547 CRIP3Q6Q6R5 217 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 ZNF799Q96GE5 643 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 TSNAXQ99598 290 aaKnown RBP17.15■□□□□ 0.34
COL13A1-201ENST00000354547 ULBP2Q9BZM5 246 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 PLEKHJ1Q9NW61 149 aa17.15■□□□□ 0.34
COL13A1-201ENST00000354547 FAM186AA6NE01 2351 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 DKK1O94907 266 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms