RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 MTRF1O75570 445 aaKnown RBP18.5■□□□□ 0.55
SNX3-202ENST00000349379 IGHA1P01876 353 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 PCMT1P22061 227 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 THBS2P35442 1172 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 HOXA4Q00056 320 aaPredicted RBP18.5■□□□□ 0.55
SNX3-202ENST00000349379 RIPPLY1Q0D2K3 151 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 TP53I3Q53FA7 332 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 KCTD20Q7Z5Y7 419 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 COMMD2Q86X83 199 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 PRIMA1Q86XR5 153 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 ZDHHC23Q8IYP9 409 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 GCSAMQ8N6F7 178 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 OR14K1Q8NGZ2 314 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 RNPEPL1Q9HAU8 725 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 AMBNQ9NP70 447 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 ACOXLQ9NUZ1 547 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 PCDHB10Q9UN67 800 aa18.5■□□□□ 0.55
SNX3-202ENST00000349379 POLR3KQ9Y2Y1 108 aaPredicted RBP18.5■□□□□ 0.55
SNX3-202ENST00000349379 DAPL1A0PJW8 107 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 ERICH4A6NGS2 130 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 A6NLC8 198 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 TMEM210A6NLX4 147 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 DHRS7CA6NNS2 312 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 CLIC3O95833 236 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 WNT2P09544 360 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 FAM157CP0CG43 387 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 CFHR2P36980 270 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 SEC61A1P61619 476 aaKnown RBP18.49■□□□□ 0.55
SNX3-202ENST00000349379 CSNK2BP67870 215 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 RAB40BQ12829 278 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 TMEM42Q69YG0 159 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 FDX2Q6P4F2 183 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 ZNF771Q7L3S4 317 aaPredicted RBP18.49■□□□□ 0.55
SNX3-202ENST00000349379 FAM220AQ7Z4H9 259 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 PRSS35Q8N3Z0 413 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 DHRSXQ8N5I4 330 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 RTL8AQ9BWD3 113 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 NKX1-2Q9UD57 310 aaPredicted RBP18.49■□□□□ 0.55
SNX3-202ENST00000349379 GNG8Q9UK08 70 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 MYRFQ9Y2G1 1151 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 RPL36Q9Y3U8 105 aaKnown RBP18.49■□□□□ 0.55
SNX3-202ENST00000349379 CUBNO60494 3623 aa18.49■□□□□ 0.55
SNX3-202ENST00000349379 PPIAL4CA0A0B4J2A2 164 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 KIAA1324LA8MWY0 1029 aaPredicted RBP18.48■□□□□ 0.55
SNX3-202ENST00000349379 LGALS8O00214 317 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 P2RY10O00398 339 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 FOXH1O75593 365 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 FAHP16930 419 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 ZFP36P26651 326 aaKnown RBP18.48■□□□□ 0.55
SNX3-202ENST00000349379 KIR3DL2P43630 455 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 OR12D2P58182 307 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 SMN1Q16637 294 aaKnown RBP18.48■□□□□ 0.55
SNX3-202ENST00000349379 WDR38Q5JTN6 314 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 WDR82Q6UXN9 313 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 DCDC5Q6ZRR9 648 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 DOK3Q7L591 496 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 EGFL6Q8IUX8 553 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 CYGBQ8WWM9 190 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 ADI1Q9BV57 179 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 BEX2Q9BXY8 128 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 MIOXQ9UGB7 285 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 ENPP5Q9UJA9 477 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 PIGLQ9Y2B2 252 aa18.48■□□□□ 0.55
SNX3-202ENST00000349379 TNFRSF13BO14836 293 aaPredicted RBP18.47■□□□□ 0.55
SNX3-202ENST00000349379 FADS2O95864 444 aaKnown RBP18.47■□□□□ 0.55
SNX3-202ENST00000349379 EGR1P18146 543 aa18.47■□□□□ 0.55
SNX3-202ENST00000349379 HNF1AP20823 631 aa18.47■□□□□ 0.55
SNX3-202ENST00000349379 IL18R1Q13478 541 aa18.47■□□□□ 0.55
SNX3-202ENST00000349379 GALEQ14376 348 aa18.47■□□□□ 0.55
SNX3-202ENST00000349379 CEACAM21Q3KPI0 293 aa18.47■□□□□ 0.55
SNX3-202ENST00000349379 IL17RELQ6ZVW7 336 aa18.47■□□□□ 0.55
SNX3-202ENST00000349379 THAP5Q7Z6K1 395 aa18.47■□□□□ 0.55
SNX3-202ENST00000349379 C19orf18Q8NEA5 215 aa18.47■□□□□ 0.55
SNX3-202ENST00000349379 OR52I1Q8NGK6 324 aa18.47■□□□□ 0.55
SNX3-202ENST00000349379 OR2G2Q8NGZ5 317 aa18.47■□□□□ 0.55
SNX3-202ENST00000349379 RNF170Q96K19 258 aa18.47■□□□□ 0.55
SNX3-202ENST00000349379 JAM3Q9BX67 310 aa18.47■□□□□ 0.55
SNX3-202ENST00000349379 METTL17Q9H7H0 456 aaPredicted RBP18.47■□□□□ 0.55
SNX3-202ENST00000349379 INPP5EQ9NRR6 644 aa18.47■□□□□ 0.55
SNX3-202ENST00000349379 LRCH1Q9Y2L9 728 aa18.47■□□□□ 0.55
SNX3-202ENST00000349379 H0YAE9 185 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 RPS2P15880 293 aaKnown RBP18.46■□□□□ 0.55
SNX3-202ENST00000349379 CD80P33681 288 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 PSMB10P40306 273 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 ACTA2P62736 377 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 ACTG2P63267 376 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 SLC34A1Q06495 639 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 TEX36Q5VZQ5 186 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 SYS1Q8N2H4 156 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 SETD9Q8NE22 299 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 CCDC54Q8NEL0 328 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 CNIH3Q8TBE1 160 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 LRRC29Q8WV35 223 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 PELI1Q96FA3 418 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 NEIL1Q96FI4 390 aaPredicted RBP18.46■□□□□ 0.55
SNX3-202ENST00000349379 ALG8Q9BVK2 526 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 FGF20Q9NP95 211 aaPredicted RBP18.46■□□□□ 0.55
SNX3-202ENST00000349379 ERVK13-1Q9NX77 482 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 HSPE1-MOB4S4R3N1 261 aa18.46■□□□□ 0.55
SNX3-202ENST00000349379 A0A0G2JMP0 313 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms