RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 PLEKHA2Q9HB19 425 aa10.03□□□□□ -0.8
SMARCE1-202ENST00000348513 ZDHHC8Q9ULC8 765 aa10.03□□□□□ -0.8
SMARCE1-202ENST00000348513 NRAPQ86VF7 1730 aa10.03□□□□□ -0.8
SMARCE1-202ENST00000348513 IGHV3-64DA0A0J9YX35 117 aa10.03□□□□□ -0.8
SMARCE1-202ENST00000348513 NXPH3O95157 252 aa10.03□□□□□ -0.8
SMARCE1-202ENST00000348513 MFAP5Q13361 173 aa10.03□□□□□ -0.8
SMARCE1-202ENST00000348513 PIGTQ969N2 578 aa10.03□□□□□ -0.8
SMARCE1-202ENST00000348513 HIST1H2BAQ96A08 127 aa10.03□□□□□ -0.8
SMARCE1-202ENST00000348513 MS4A6EQ96DS6 147 aa10.03□□□□□ -0.8
SMARCE1-202ENST00000348513 EMC6Q9BV81 110 aa10.03□□□□□ -0.8
SMARCE1-202ENST00000348513 NOX4Q9NPH5 578 aa10.03□□□□□ -0.8
SMARCE1-202ENST00000348513 DECR2Q9NUI1 292 aa10.03□□□□□ -0.8
SMARCE1-202ENST00000348513 MAST2Q6P0Q8 1798 aa10.03□□□□□ -0.8
SMARCE1-202ENST00000348513 A0A087WUU8 490 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 SLC5A10A0PJK1 596 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 KLRC4-KLRK1H3BQV0 150 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 CD200P41217 278 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 TSPAN7P41732 249 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 ASCL1P50553 236 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 PAFAH1B2P68402 229 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 ARRDC1-AS1Q9H2J1 176 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 TMEM129A0AVI4 362 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 MAP1LC3B2A6NCE7 125 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 OMGP23515 440 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 SLC6A12P48065 614 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 HLA-DRB3P79483 266 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 ACSM5Q6NUN0 579 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 SUMF1Q8NBK3 374 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 OR13C8Q8NGS7 320 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 MAP1LC3BQ9GZQ8 125 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 WDR76Q9H967 626 aa10.02□□□□□ -0.8
SMARCE1-202ENST00000348513 ZC3H12DA2A288 527 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 COX5BP10606 129 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 CR2P20023 1033 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 BTG2P78543 158 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 BAXQ07812 192 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 ELOBQ15370 118 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 LHX8Q68G74 356 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 LYG2Q86SG7 212 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 MRPS2Q9Y399 296 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 HPP00738 406 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 GRPP07492 148 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 CTSLP07711 333 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 CALCBP10092 127 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 ZNF787Q6DD87 383 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 DMBX1Q8NFW5 382 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 ADAMTS17Q8TE56 1095 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 SLC35E1Q96K37 410 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 ASB1Q9Y576 335 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 CST4P01036 141 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 ST6GAL1P15907 406 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 BSGP35613 385 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 SNRPNP63162 240 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 AADACL3Q5VUY0 350 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 RTL6Q6ICC9 239 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 OR5AS1Q8N127 324 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 OR11L1Q8NGX0 322 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 PLK3Q9H4B4 646 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 SLC23A2Q9UGH3 650 aa10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 MRPS28Q9Y2Q9 187 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 DDX60LQ5H9U9 1706 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-202ENST00000348513 A0A1W2PR48 441 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 FABP2P12104 132 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 SIGLEC14Q08ET2 396 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 C1orf140Q5VVS0 124 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 OR4F5Q8NH21 305 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 NUBPLQ8TB37 319 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 TMEM106AQ96A25 262 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 OR4F4Q96R69 305 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 CHODLQ9H9P2 273 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 ZMAT3Q9HA38 289 aaKnown RBP10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 NGBQ9NPG2 151 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 ZNF355PQ9NSJ1 428 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 PTGER4P35408 488 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 PNRC1Q12796 327 aaPredicted RBP10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 UBE2FQ969M7 185 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 R3HDM4Q96D70 268 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 TMEM212A6NML5 194 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 CXCL3P19876 107 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 EDDM3BP56851 147 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 NKAIN4Q8IVV8 208 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 PIMREGQ9BSJ6 248 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 TMEM59Q9BXS4 323 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 AUNIPQ9H7T9 357 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 PDFQ9HBH1 243 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 GNG12Q9UBI6 72 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 COA3Q9Y2R0 106 aaPredicted RBP10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 MEX3AA1L020 520 aaKnown RBP10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 TK1P04183 234 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 ECI1P42126 302 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 TCTAP57738 103 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 MRPL58Q14197 206 aaKnown RBP10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 PRTGQ2VWP7 1150 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 LINC00303Q3SY05 128 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 NHLRC3Q5JS37 347 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 NHLRC1Q6VVB1 395 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 Q6ZS52 159 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 RPS19BP1Q86WX3 136 aaKnown RBP10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 OR10P1Q8NGE3 313 aa10.01□□□□□ -0.81
SMARCE1-202ENST00000348513 DIRC3C9JPN6 131 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms