RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 BTCP35070 178 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 SLC6A9P48067 706 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 TAS2R20P59543 309 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 TSPO2Q5TGU0 170 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 ZNF774Q6NX45 483 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 ZNF813Q6ZN06 617 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 RNF144BQ7Z419 303 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 LYPD6Q86Y78 171 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 TOMM5Q8N4H5 51 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 ZNF565Q8N9K5 539 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 TMEM178AQ8NBL3 297 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 DUSP18Q8NEJ0 188 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 OR1M1Q8NGA1 313 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 OR52N4Q8NGI2 321 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 OR4D6Q8NGJ1 314 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 ZFAND1Q8TCF1 268 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 SMIM4Q8WVI0 70 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 SNAPC3Q92966 411 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 TMEM45BQ96B21 275 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 PGAM5Q96HS1 289 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 RNF170Q96K19 258 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 LYZL4Q96KX0 146 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 FOXB1Q99853 325 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 LDAHQ9H6V9 325 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 EXO5Q9H790 373 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 RNF121Q9H920 327 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 ACKR4Q9NPB9 350 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 GLS2Q9UI32 602 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 RHBDD3Q9Y3P4 386 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 ORC5O43913 435 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 MRPL33O75394 65 aaKnown RBP8.06□□□□□ -1.12
ATG4A-202ENST00000345734 CTAG2O75638 210 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 KDM4BO94953 1096 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 IGLV1-40P01703 118 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 CST2P09228 141 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 ZNF32P17041 273 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 BDKRB2P30411 391 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 GDNFP39905 211 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 MECP2P51608 486 aaKnown RBP8.06□□□□□ -1.12
ATG4A-202ENST00000345734 RAB14P61106 215 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 RPL11P62913 178 aaKnown RBP8.06□□□□□ -1.12
ATG4A-202ENST00000345734 OR10K2Q6IF99 312 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 PLET1Q6UQ28 207 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 SLC22A24Q8N4F4 322 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 CLRN3Q8NCR9 226 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 OR6M1Q8NGM8 313 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 OR13C9Q8NGT0 318 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 AKR7LQ8NHP1 331 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 UPRTQ96BW1 309 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 ST6GAL2Q96JF0 529 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 PRRG4Q9BZD6 226 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 IFT46Q9NQC8 304 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 TINAGQ9UJW2 476 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 MCTS1Q9ULC4 181 aaKnown RBP8.06□□□□□ -1.12
ATG4A-202ENST00000345734 TRGV5A0A0B4J1U4 118 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 LOC390937A0A1W2PQ73 354 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 M0R135 149 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 ACOT7O00154 380 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 TSPAN4O14817 238 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 SGCEO43556 437 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 SYNGR3O43761 229 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 KRT33AO76009 404 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 WISP2O76076 250 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 ARSBP15848 533 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 ZNF20P17024 532 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 SDHBP21912 280 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 CCL1P22362 96 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 SLC6A1P30531 599 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 OTX1P32242 354 aaPredicted RBP8.05□□□□□ -1.12
ATG4A-202ENST00000345734 SCAND1P57086 179 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 KLF9Q13886 244 aaPredicted RBP8.05□□□□□ -1.12
ATG4A-202ENST00000345734 KIR3DS1Q14943 382 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 PLA1AQ53H76 456 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 DMRTC1Q5HYR2 192 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 RIPPLY2Q5TAB7 128 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 C9orf135Q5VTT2 229 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 HACD4Q5VWC8 232 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 ZNF529Q6P280 563 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 ANKRD16Q6P6B7 361 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 TMEM65Q6PI78 240 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 SKA3Q8IX90 412 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 OR14K1Q8NGZ2 314 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 ZNF799Q96GE5 643 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 WDYHV1Q96HA8 205 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 SPACA5Q96QH8 159 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 SLCO5A1Q9H2Y9 848 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 CNTD2Q9H8S5 307 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 ZDHHC11Q9H8X9 412 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 SLC7A10Q9NS82 523 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 ING3Q9NXR8 418 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 KLK11Q9UBX7 282 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 ATMQ13315 3056 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 CIB4A0PJX0 185 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 GABARAPH6UMI1 98 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 ZNHIT1O43257 154 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 XRCC3O43542 346 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 GMDSO60547 372 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 ACTL6AO96019 429 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 IGLV3-1P01715 115 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 MT-ND4P03905 459 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms